| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0436 |
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| Symbol | |
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| ID | 6109344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 474745 |
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| End bp | 480288 |
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| Gene Length | 5544 bp |
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| Protein Length | 1847 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641620192 |
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| Product | leucine-rich repeat-containing protein |
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| Protein accession | YP_001747310 |
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| Protein GI | 170719622 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTCA GCATGCCTAG CCCGACCGGC AAGACCCTCA CCTCGCCAGG TACCCCGTAC
GCCACCATCG AACAAAAAAT CCCTGCCTGG CTGAAAACAG CTTCCCCCGA CACCCTGCAC
CCAATGCGCA ACTGGAAGCA GGCCCCCACC TGGCTGGCCA CGGCCATCCT GCAAATGCCG
GACATCGCCA AAGCCTGGCG TGACGAGCAT GCGCGCCACC GCGACCACGC GGCACAGGTG
CGCAGGCTGT TTGAAGCGCT TCCCGACCTG CAATCCTGGG CCAGACAGCA ACTGACAGAC
GCAATCACCG AGCGGTTTGG CCTGACTGTC GATGTGGATA ACTGCTACTT GGTGGATGCA
CGCCTTATCG ACATGGCCAA TGCCATCGAC AGCCGTCAGG CCATCGACCG CGCCACCCGC
TCCCTGCTGC ACTGCGCCCT GCAGAACTTC GATGCTGCAG CCGCCGTCGA GGGTGGGATG
GATGCCGATG GCGGGCCACT GAAGAAATCC GTCATTCTCG ATCACCGACG TTTCATGGGT
ACGGTGCCCA TCACCAACAC CCTGGACATC GCCGCGGAGG GGTTTGCAGA CTTGTGCCGT
GAGCTGGACC TGGGCCGCAA ATACCACGAC AGGCTTCACG CCATCTACTA TCCCGAAGCC
ACAGCACAGC TGAGCGCCGA TGAAGCTGCG CTGAACGTGT ATCAAGCTTT GGGCCGCGCC
GAAGTATCGG CATTCAGGCA ATCCCTACAT TTCGCCCGGC TCAAGGGCGA CATCAGCGAG
GTCCTGTACA CCACCGCCCT TGTCACCCCC CTCGACAAGC TGCCGGCTGA ACCTGAAAGA
CCGGCGATCG CTTTCAGCCT GCTCACACTT TGGGAAACCG AACTCACCGG CATCGCGCTC
ATCACCTTGC GAACATCGGC TCAAGAAACC GTGGCGCTGT ACATACCAGA TGACAGCGAG
ACACCGCTGA AGGAATTCGC CTCCCTGGAA GCCCTGAAGG CCGATCTGAG CAGTCGGCTA
AGGGCGAACA TCGCTTACCT GGACAGGCAT GTTGCCGACC GCGACAAAGC CTCGGTGATC
GCCCGCCTCA AGGACCGCCT GACCCCCATC GGCTGGAGCA TCCGCGGCCT GCATGAGCGG
GTGCCGGATC CGCATGCAAC GCTGTACCCG GTCGCACAGC CTTTCCGTCA TGCATTTCAG
GGTGTCATGG CCTTCCAGAA AGCCGAGCGC CACGAAAAGG ATGTGCTTTT CCACGCTGTA
CCCACAGAGA TCGTCGACCG ACGTGCCGCC CACGCCCACC GACAGTTGAT TGCCGGGCGA
GTGCTGACGG GCTTGAACAT CGCAGGCTTT TTCGTTCCGG GCCTGGGCGA GGCCATGATG
GCTGTATGTC TGACACAGCT GGCCTGTGAG GTCTATGAAG GAATCGAAGC GTGGAAAAAC
GACGAACGCG ATGCGGCCTA CGGGTATCTG GTCGATGTTG TCGAGAACGT GGCGCTCATG
GTGGCGCTCT CTGCCGCAGC CAAGGCTTTG AAGAACGAAG GGCAAGACGC TGCAGGCGCA
CCGGCAGAGG AACACGAGGT GGAGCGTATT CCCGTGGAAA CGCCCTCCTT TATCGAAGAG
CTGGAAAATG TCGAATTGCC TAATGGCGAG GCTCGCCTAT GGAAGCCCGA CCTGACGCCG
TACCGCAGCC CCCAGATGCT GCCCGCAAAC CTGGAACCCG ATGAACATGG CCTGCTTCAC
TATCAAGGCA AGCGCTGGCT TGTCTTGCAG GGGAACCAGT ACATCGTCAG GCCAGCCGCG
GCAACTGACG AGTACCGCCT CGTGCACCCG TCCAGGCCTG TGGCACATGA GCCAGCGCTT
CGCCATAACG GCGCCGGCGC CTGGCTGTTG CCGCTGGAGC ACCCTCTGCA ATGGTCAAGA
ACGACCCTGG TGCAACGCAT GGGCCTTGCG AGCCGGCAAT TCTCAGAAGA AACAGCCTTG
CAGATACTGC GTGTCTGCGA CGTACATGAA GACGTTCTGC GCCATGCCCT GACAGAGAAC
CTGAGGCTGC CTGGCCTGCT TGAGGACACT CTGGCCCGCT TCAGGCTGGA CCAGGCCGTC
CGTCGGTTGC CTGACAGGCA CCAATGGCCC GCTGAACTCG AACGTGTCTA CGCGCGCATG
CCAGCGAGCC AGGCTACCGG CGCGGCAGTC ATTCAGCGGG TCTATCCGAA CTTGCCCGCA
GCAATCACCG AAGAGTTGTT GCGCAACGCC GCCAGCGACG AACTTGCGGC ACTGAGCGCC
GGCAAGCTGC CTGTGCGCCT GACTGAAGAG ATACGCATCT TCCAACAACA GGTACGCCTC
GCCAGGGCCT ACGAAGGGCT ATTCCTGAGC AGCGTTCGTA GCGGCGACAC TGATCGGCTG
ATCATGCACT CACTCGAACT GCTGCCTGGC TGGCCAAGTG AGACCAGGCT CGAGCTTCGC
CAGCACCGTT TCTGGCCTGC TCATCGTGAA AACGTGGGGC CAACGGATGC GCGGTATGTC
AGGGTAATTA CCAGCGCTGA AGCAGGGTAT ATCGTCCATG CCGAGACAGG GGCGCAAAAC
CCGGTCACCG TACATGGCGA TCTGTGTACG GCTATATATT CAGCGCTGCC CCAGGCGATG
ACCCGAATGG GCATTGTAAA CGGGGCTGAA TTGCGTCTGC AGTTGCAGGA AGGCCCACTG
TTGCCACGTG CCTCACTCAG GCAGGTGCTG GGCATGCAAC CTGTGCGGCC GGGTTACCGC
TCCCCCATGC GGCTCGCTGA CGGGCGCATT GGGTATCCGT TGAGCGGCGG TCTGCCGGCG
GCACCAGGTA TCAGCCGCCA TATCTTGCTC GATGCCGTCA ACGCAACAGG GCTCACCGAA
CATACACCCA GGTCGGCGGA TCAGATTCTG ATGATCATCG CCCGCAATGG CCGCAACCCG
CAGCAAGTGT TTGGACGGCT GCAGCAACTG GTGGATCAAC GCATGGAGAT GCAAAGCCGG
CTGGACGACT GGAACGAGGG CATGTCGCCA GAGTCCGATC GGGCAGCGCA GCGATACAAC
GCCCTGCGGC AAGCCATCAT GCAGCACTGG TACGACACGG CATTGATCGA TGGTGACAGC
CACACCAGTG AGTTGAGCCT GGAGCACGTG CCTCTGGCCG ATATCCCCAT GACCCTGCCG
GGGTTCTTCA CCTCAAATAT TCGCAGGTTG CGGCTTTACG ACCTGCCATC AGGCACCCTC
GCCGGTTGGG CGCAGAACGA ACGCTTGCTG CAACGTCTGC TCAGGCAGGT ACCGCAACTC
GAATCTCTGG AGATCAGCCG GGCCTACGAC CCCACCGCTA CACCGTCCTC TTTCATTTTC
AGCATCCCTA CGATCACCGA GCACTTGCTT GGGCTGCGAG CGCTGAGCTT CATCAACCAG
AACGTCGCAC TCACCTCCAA TGACTTGAGC CAACTGGCCC AGATGCCTCA GCTCAGGTAT
CTGGACCTGA GCGGTAATCG CTTCGCCCAG CGCGACAGCC CCAGTTTCCA TGAACTTTCT
CTGGACTACC TCGGCCTGAA CACCATGCAA CTGCATCAAT GGCCTATCGG GCTGGGCAGC
GACGCACTGG AGCGAATTGC TCACCTTTCG CTGCGTAACA ACAATCTCCG GTCGCTCCCC
TCGTTCCTGT TTACCGAAGC AGAAGCTATC CAACGTCCAT CGAGTCTTTC GCTGGAGGGC
AACGACATCA ACGAAAGCCA TCTGCAGCGC CTGCTACTGA GCGAGAGCCG GATGACTGTT
CAGGTCAATG TGGATCATCC CCCTGAACTG ACCCAACGAC TTGAGCGAAT CCAGAATGAG
CGGCAGCAAC TGCGCGAGGC GATCGAAGGC TGGGCGCAAG CCTCAAGCTC CAATGCTCCT
CTGACCCAAG CGGTGCTTGA GGACAGGCAA CGCATCGAAG TGGCGATCAC CGAGTTCTGG
TCCAGGCAGG AGCAGGGTTT GCAATACCTT CGGCTGCAAC TTGAAGATGT GGCACTGGAG
CACTTCCCGC GGCGGCTGCC GAGCTTCTTC GGCGAACGCG TGACCGCCTT GACGCTGACA
CGCGTCAGCG GCTCAACCGC TCAGCTCAAC GAATTGCTGG GGCGCTTCCC CAATATCTCC
CGGCTAACCC TCGAAGCGCA CGTAGCGCCA ATGCCATCGC TGCCATCGGC CTTGGTACGG
TTGCAGCGGC TCGCGCATCT GGAATTTCGA AACATGGGCC TGGAAATCGA CCAGGCCATG
ATCGAAGCCT TCGGGCGTTT ACCGCAACTT TCGTCGCTGG ATCTGTCGGG TAACCAGATC
GGTGCCATTA CCCAGATACC AGCAAACCTC TCATCGAACC TGACATCACT GAGCCTGACC
AACATGAACC TGCACGCCTG GCCAGCCTGG TGCGATGCCC TGCTGCCATT GGAGTTGCTG
GATTTGAGCT CCAACCATAT CTCGGAGCTG CCCAACCATA TTCTGGAAAA CATCCACAAC
CCGATGCCGA TCTCCTCGAT CTCGATGTTC GACAACCCTC TGTCAGAAGA TACGATCCAA
CGGGTGCGCA CGTTTTCCGA CAGCCAGCAC AGCCTCTCCT TCGCCCTCGA CATCCCCGAC
AACCTTGTCC TGCCCGAATC TTCTGATGAG GGTTCACTAC TCGATCATCC TCACTTCCCA
GTGCCCTACG CCGGCGACGA CTCACCAAGA CTGGAGGATT GGGCGCTTGG CAACGAAGCG
CAGAACGAAG CCCTGCGAGA CTGCTGGCAA AGGCTGCAGA CGCTCGAAAG TGGTCATAAC
CTGTTGGCCC TCGCTGGCCG CTTGCGCAAT GCGGCGCCCT ACCTCGACCC TACCTCGCAA
GCCGCATTCT GCGAGCGCGT GCGCATGATG CTGGTGATTG CGGCAACCCA TGAGCATGAG
CTGCCAACCA TGAGCAGCAT CGCCGCGGCA GCCCTGCCCG ACCCGGTCAC CGGCTCGCAG
ACCTGCCACG ATGGCGCGCT TCAGGAGTTC AACAATATCG AGCTTTACCT GATGTCGAAC
CGCATCCTCA CTGACGCGGG CGACTCCTTG CCGGCCTTTT ATCGGCGCCT GCTTCAACTG
TACCGGATCG GTCAGCTGGA ACTGCTGGCC AACAGCCGGA CAGGTCAGGG TGACCGGGTC
TCGGTACGCC TGGCTTACCG CCGGGAGCTG GCCCGCGAGC TGGACCTGCC GATTGCCGAC
AGTATGCGTT TTCGCGGCGC GGCCATGCTG GCGCCGGGTG AAATTTCCAG TGTTCTGGAA
CGCATCCGGG AAAAGGAAAA CAGTGATGCG TTCATCCAGT ACATGCTGGC GAACGATGAC
TGGACCCGCC GATTGCGCGC TGAATACCCC GGCCAGTTTG CCGAGATAGA ACAACGCTTT
GGCGAGCACG TGCTCGAACT GGCTGCGCTC GACCTGCCGC TGACGGAGGA GCTGGTATTG
CAGCAGAACC TGCAAAACGA CAAAGACCAC CAAGAGCTGG AGCTGCTTCA GGAACTGACC
CGTATGCAGG GTCGGCACGA ATGA
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| Protein sequence | MDLSMPSPTG KTLTSPGTPY ATIEQKIPAW LKTASPDTLH PMRNWKQAPT WLATAILQMP
DIAKAWRDEH ARHRDHAAQV RRLFEALPDL QSWARQQLTD AITERFGLTV DVDNCYLVDA
RLIDMANAID SRQAIDRATR SLLHCALQNF DAAAAVEGGM DADGGPLKKS VILDHRRFMG
TVPITNTLDI AAEGFADLCR ELDLGRKYHD RLHAIYYPEA TAQLSADEAA LNVYQALGRA
EVSAFRQSLH FARLKGDISE VLYTTALVTP LDKLPAEPER PAIAFSLLTL WETELTGIAL
ITLRTSAQET VALYIPDDSE TPLKEFASLE ALKADLSSRL RANIAYLDRH VADRDKASVI
ARLKDRLTPI GWSIRGLHER VPDPHATLYP VAQPFRHAFQ GVMAFQKAER HEKDVLFHAV
PTEIVDRRAA HAHRQLIAGR VLTGLNIAGF FVPGLGEAMM AVCLTQLACE VYEGIEAWKN
DERDAAYGYL VDVVENVALM VALSAAAKAL KNEGQDAAGA PAEEHEVERI PVETPSFIEE
LENVELPNGE ARLWKPDLTP YRSPQMLPAN LEPDEHGLLH YQGKRWLVLQ GNQYIVRPAA
ATDEYRLVHP SRPVAHEPAL RHNGAGAWLL PLEHPLQWSR TTLVQRMGLA SRQFSEETAL
QILRVCDVHE DVLRHALTEN LRLPGLLEDT LARFRLDQAV RRLPDRHQWP AELERVYARM
PASQATGAAV IQRVYPNLPA AITEELLRNA ASDELAALSA GKLPVRLTEE IRIFQQQVRL
ARAYEGLFLS SVRSGDTDRL IMHSLELLPG WPSETRLELR QHRFWPAHRE NVGPTDARYV
RVITSAEAGY IVHAETGAQN PVTVHGDLCT AIYSALPQAM TRMGIVNGAE LRLQLQEGPL
LPRASLRQVL GMQPVRPGYR SPMRLADGRI GYPLSGGLPA APGISRHILL DAVNATGLTE
HTPRSADQIL MIIARNGRNP QQVFGRLQQL VDQRMEMQSR LDDWNEGMSP ESDRAAQRYN
ALRQAIMQHW YDTALIDGDS HTSELSLEHV PLADIPMTLP GFFTSNIRRL RLYDLPSGTL
AGWAQNERLL QRLLRQVPQL ESLEISRAYD PTATPSSFIF SIPTITEHLL GLRALSFINQ
NVALTSNDLS QLAQMPQLRY LDLSGNRFAQ RDSPSFHELS LDYLGLNTMQ LHQWPIGLGS
DALERIAHLS LRNNNLRSLP SFLFTEAEAI QRPSSLSLEG NDINESHLQR LLLSESRMTV
QVNVDHPPEL TQRLERIQNE RQQLREAIEG WAQASSSNAP LTQAVLEDRQ RIEVAITEFW
SRQEQGLQYL RLQLEDVALE HFPRRLPSFF GERVTALTLT RVSGSTAQLN ELLGRFPNIS
RLTLEAHVAP MPSLPSALVR LQRLAHLEFR NMGLEIDQAM IEAFGRLPQL SSLDLSGNQI
GAITQIPANL SSNLTSLSLT NMNLHAWPAW CDALLPLELL DLSSNHISEL PNHILENIHN
PMPISSISMF DNPLSEDTIQ RVRTFSDSQH SLSFALDIPD NLVLPESSDE GSLLDHPHFP
VPYAGDDSPR LEDWALGNEA QNEALRDCWQ RLQTLESGHN LLALAGRLRN AAPYLDPTSQ
AAFCERVRMM LVIAATHEHE LPTMSSIAAA ALPDPVTGSQ TCHDGALQEF NNIELYLMSN
RILTDAGDSL PAFYRRLLQL YRIGQLELLA NSRTGQGDRV SVRLAYRREL ARELDLPIAD
SMRFRGAAML APGEISSVLE RIREKENSDA FIQYMLANDD WTRRLRAEYP GQFAEIEQRF
GEHVLELAAL DLPLTEELVL QQNLQNDKDH QELELLQELT RMQGRHE
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