| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0350 |
|---|
| Symbol | |
|---|
| ID | 6109130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 369037 |
|---|
| End bp | 370380 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641620107 |
|---|
| Product | peptidase M16 domain-containing protein |
|---|
| Protein accession | YP_001747225 |
|---|
| Protein GI | 170719537 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0612] Predicted Zn-dependent peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCATCGA CTCCCCCGTT TACCCTCGAC GACAAAACAC TGTCAGCCGG CATCGAGTCC
ATCGCGGATG CCACCCAGCC CTCGTTGCAG CACTTCACAC TGGATAACGG CCTGAGTGTC
TACCTGCGCG AGGACCACAG CACCCCGCTC GCCGCAATCC AGCTCTGGTA CCACGTTGGC
ACCAGCCATG AACCAGCCGG CCATACCAAC CTCTCGCACC TGCTGGAACA CCTGATATTC
GAAGGCAGCC GCAAACTCGA GGCGGGCCGA TACACCCAGG TGATAGCACG GCTCGGCGGA
GAGGCCAATG CCACTACCAC CGATGATGCA ACGGCATACG ACGTACTGTT ACCCGCGGCA
CGATTGCCGA TTGCGCTGGA AATAATGGCG GATGCCATGA CGGGCGCAAC CTTTGGCCAG
GCAGAAATGG AACGGGCAGT CAAAGCGATC GAAGACGAGC GGCGACTCAA AGTTGAAAAC
GTTCCTGCAC AGCAAGCCGC CGAACGACAC ATGGCGCTTG CGCACGGTGG CAGCCCGTAT
GCCACGGCGA CGTTTGGCAA CCCGTCAGAC CTGAGCAACT TGCGCTTGGA TATGGTGCGT
ACCTGGTATC AAACGTGGTA CCGGCCCAAT AACGCCACCC TCGTGGTGGT GGGCGCGGTC
GATCTTCCCA CGCTTCGCCA GCACGTAAGC CGCTATTTCG CCAGCATCGC CAGGGCTTCG
CTTGGCGCAG TACCGGTCCC CCGGCATGAC GCGCACCTGC AGGAACGAAG CCAGAAGCTG
GAACTGCCAG GCCTGCGTGA TGGTTTGTTC ATGTCCTTCA ATGTACCAAG CCACGCCACG
GCCATCGACG CAAGCACAGT GCCTGCCCTG GGCCTGCTCT GTGAAGTGCT TGGCAAGGGG
TTCAGCGCAA GGCTCTACAG CGAGCTGGTG CGAGACCAAC GGCTGCTCAA GGGCATCGGC
CTGTCATATG AGCCAATAGC GCGTGGCGAC ACGCTGTTGA CCCTCTCAAC CTATATCAAC
AGTCAAAGAT CCACGCACGA GCACGCCGTA GAAGCGATCT ATGCCTTGAT CGATACCCTG
CGCCATACGC TGCTTTCCCC CCAGGAACTG GAGCGCGCGA AACTGCGCAT GCTTACCCGC
CGCCTGTTCA GCCGCGACAG CATCACCCTT CAAGCTGAGC GCATCGGTGC AGGGGCGGCC
GCTGGTCTGT CTACCTCGCT GATCGATCAA GAAGCCGAAA GTGTCCGCCA CCTCGATAGC
GCGACATTAC GACAGGTAGC GTTCGACTAT CTGAGCCGCG AAAGGCTGAC CATCACTCAC
CTGCAAACAG GAGCAGCGGC ATGA
|
|---|
| Protein sequence | MPSTPPFTLD DKTLSAGIES IADATQPSLQ HFTLDNGLSV YLREDHSTPL AAIQLWYHVG
TSHEPAGHTN LSHLLEHLIF EGSRKLEAGR YTQVIARLGG EANATTTDDA TAYDVLLPAA
RLPIALEIMA DAMTGATFGQ AEMERAVKAI EDERRLKVEN VPAQQAAERH MALAHGGSPY
ATATFGNPSD LSNLRLDMVR TWYQTWYRPN NATLVVVGAV DLPTLRQHVS RYFASIARAS
LGAVPVPRHD AHLQERSQKL ELPGLRDGLF MSFNVPSHAT AIDASTVPAL GLLCEVLGKG
FSARLYSELV RDQRLLKGIG LSYEPIARGD TLLTLSTYIN SQRSTHEHAV EAIYALIDTL
RHTLLSPQEL ERAKLRMLTR RLFSRDSITL QAERIGAGAA AGLSTSLIDQ EAESVRHLDS
ATLRQVAFDY LSRERLTITH LQTGAAA
|
|---|
| |