| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0299 |
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| Symbol | |
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| ID | 6109079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 313921 |
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| End bp | 314751 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641620056 |
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| Product | putative sigma54 specific transcriptional regulator |
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| Protein accession | YP_001747174 |
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| Protein GI | 170719486 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0686936 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTTC AACACCCGTT TGGCCAGCCA CTGCTGACCT TCCCCGAGCT GGACAAAAGC
CCGCTGAGCA TCCGTGCCAA GGCCTTGGTG TTCATCGACC CGCGTTCACA GCAGTTACGC
GAAGACCTTG AGCGTCTGGC ACCGCAACCC TTGCCGGTGC TGATCCGTGG CGAAACCGGC
ACGGGCAAGG AACTGCTGGC CCGGCAGATC CATCGTGCCA GCGACCGTGG AGGGCTATTC
GTGTCGGTCA ACTGTGCGGC TATCAGCCCC ACTTACGCCG ATGCCGAGCT GTTCGGCTAT
AGCGCTGGCA GCCATGGCGG TACGGCCAGC AGCCGCGCCG GCTGGTTCGG TTCGGCCAAC
GGCGGCACGC TGTACCTGGA CGAGATTGCC GACTTGCCGC TGGCTATCCA GGGTAAGCTG
CTGGCGGCCC TGGAAAACCG CGAGGTCACC CGGGTGGGCG CGCAGCAGCC ACAGCCGGTG
GACGTGCGCC TGGTGGCTGC GACCAGTATT GACCTGGCCC GGGTGGTTAA AGCTGGCAGG
TTCAATGAAC GCTTGTACCA GTACTTGCAC GAAGGTGCGC TGGAGCTGCC TCCGTTGCGT
GAGCGCTGCG GCGATATCCT GCCGTTGGCT GAGTATTTCG TGGGCATCTA CTGCGCACGC
CTGCAGCGCC CTGTGCCGTT GATCAGCGAA GCGGCCCAGC AGGTGCTCGA AGCCCACACG
TGGCCCGGCA ATACCCGCGA ACTGGAGAAC ATCATCCACT TCGCCCTGCT GGTGAATGAC
AGTGAAGAGA TCCAGCCAGA GGACCTCGAC CTGCCGAATA CCCCGCGCTA G
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| Protein sequence | MTLQHPFGQP LLTFPELDKS PLSIRAKALV FIDPRSQQLR EDLERLAPQP LPVLIRGETG
TGKELLARQI HRASDRGGLF VSVNCAAISP TYADAELFGY SAGSHGGTAS SRAGWFGSAN
GGTLYLDEIA DLPLAIQGKL LAALENREVT RVGAQQPQPV DVRLVAATSI DLARVVKAGR
FNERLYQYLH EGALELPPLR ERCGDILPLA EYFVGIYCAR LQRPVPLISE AAQQVLEAHT
WPGNTRELEN IIHFALLVND SEEIQPEDLD LPNTPR
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