| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0288 |
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| Symbol | |
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| ID | 6109068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 302380 |
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| End bp | 303447 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641620045 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001747163 |
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| Protein GI | 170719475 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.527133 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAAG TACTGCTGAT GTGTGCGGCA TGCTTGCTGT TGATGGCCTG TGGCAGAGAG
GAAGAACAAC CCGAAGCTGT GCGACCGGTG CTATCAACCG TGGTCGAAGC CCAGGCGCAG
TCGCAGCTTG GCCGCTTCGC CGGTACCATC CAGGCGCGCT ATGAGAGCAC GCTGGGTTTC
CGGGTGGCCG GGCGCATTGC CCGGCGCTGG TTGGATGTGG GGGCTCAGGT CAAACCGGGT
GACACGCTCG CCACCCTTGA TCCCACCGAC CAGCAGAACC AGTTGCGCGC TGCCGAGGGC
GACCTGGCCA GGGTCCAGGC GCAATGGATC AACGCCCAGG CCAATGCCCG CCGGCAACAA
CAGTTGTATG ACCGTGGCGT CGGCGCCCAG GCCCAGTTGG ACATTGCCCA GACCGACCTG
AAAACCACCG GCGCGAGCCT GGAGCAAGCG CGCTCGGCGG TCAGCCAAGC GCGTGACCAG
CTCGATTACA GCACCTTGCG CAGCGACCAT ACAGCGGTGA TCACGGCCTG GCAGGCAGAG
GCCGGGCAGA CGGTCACCGC CGGTCAGGCG GTGGTCACGC TGGCCCGGCC TGACATCAAG
GAAGCCGTGA TCGACCTCCC CATCAGCATC GCCGAACAGC TGACCAAGGA CCTGACGTTC
ACGGTTGCCT CGCAATTGGA CAACAGCATC AATACCACTG CCACGCTGCG TGAGCTGGAG
CCCCAGGCTG ATGCCGCCAC GCGCACCCGG CGTGCCCGCT TGACCCTTGC CAGTACACCC
GATGCCTTCC ACCTGGGCAC CGCGATCAGT GTCACACTGA CCTCGGCAAT CACCCCGCGC
AGCGAATTGC CGCTGAGCGC GCTGCTTGAA CGCGATGGCA AGACCCAGGT ATGGGTCATC
GACCCGCAGC AAAAAACCGT CGCTACCCGC GACGTTGCCC TGCTGGACCG CACCGGCGAC
AGTATCGTGC TGGCGTCTGG AGTGCAGCCT GGCGAGCGTG TGGTCACTGC CGGCGTCAAC
AGCCTCAAGC CTGGCCAGAA GGTCACCTTC GACGAGGATG CGCAATGA
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| Protein sequence | MNKVLLMCAA CLLLMACGRE EEQPEAVRPV LSTVVEAQAQ SQLGRFAGTI QARYESTLGF
RVAGRIARRW LDVGAQVKPG DTLATLDPTD QQNQLRAAEG DLARVQAQWI NAQANARRQQ
QLYDRGVGAQ AQLDIAQTDL KTTGASLEQA RSAVSQARDQ LDYSTLRSDH TAVITAWQAE
AGQTVTAGQA VVTLARPDIK EAVIDLPISI AEQLTKDLTF TVASQLDNSI NTTATLRELE
PQADAATRTR RARLTLASTP DAFHLGTAIS VTLTSAITPR SELPLSALLE RDGKTQVWVI
DPQQKTVATR DVALLDRTGD SIVLASGVQP GERVVTAGVN SLKPGQKVTF DEDAQ
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