Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0268 |
Symbol | |
ID | 6109047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 280146 |
End bp | 281495 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641620024 |
Product | hypothetical protein |
Protein accession | YP_001747143 |
Protein GI | 170719455 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1030] Membrane-bound serine protease (ClpP class) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGATCGCTC GCTGCTGGCG CTGGTGGTTG CTGGTTTTGA TGCTTGGCTT TGCACCGGGC AGCCAGGCTG CGCCCGGCGC TATCTGGGTG CTGAGCATCG ACGATGCCAT AGGGCCGGCC AGTGCCGATT ATCTGATGCG CGGCCTGGAT CAGGCCAGGG AACAAGGCGC GCAATTGGTG GTGATCCGCA TGGATACACC CGGCGGCCTG GACAGCGCCA TGCGTCAGAT CATCAAGGTT ATTCTCGCCA GCCCCGTGCC GGTCGCGACC TTCGTTGCCC CAGGCGGTGC CCGTGCAGCC AGCGCTGGCA CCTACATCCT TTATGCCAGT CACGTAGCGG CCATGGCTCC CGGGACCAAC CTCGGCGCCG CCACACCCGT GCAGGTTGGC AGCCCCACGG GTGCGCCAAA GGATGACAAG GCCAAAAACG ACACCAATGA ACAAGCCCTT GCGCGCAAGC AAGTGAACGA TGCAGCCGCG TATATCCGCG GCCTGGCGCA GCTGCGCGGG CGCAACGCCG ACTGGGCAGA AAAGGCTGTA CGCGAAGCGG TAAGCCTGTC GGCCAGCGAA GCGTTCAAGC AGAAGGTGAT CGACCACGTG GCCAACGACC TGCCTGACCT GCTGCGCCAG CTCGACGGCA AGACCCTGAT CGCCGCTGAC CAGCCGCGCC AGTTGCAGAC TCGCGACGCC AGCCTGGTCG AACATGTGCC GGACTGGCGC ACGCGCCTGC TGGCCGTGAT CACCAACCCT AGCGTGGCAC TGATTCTGAT AATGATCGGC GTCTATGGCC TGCTGTTCGA GTTCATGAAC CCAGGCTCCG GCGTGGGCGG CGTGGTCGGT GGAATCTGCC TGTTGCTGGC GCTGTATGCC CTGCAATTGC TACCGGTGAG CTTTGCCGGT GTCGCGCTGG TCATGCTCGG TATCGCCTTC ATGATCGCCG AGGCGTTCCT CCCCAGCTTT GGTGTGGTCG GCTTCGGCGG CATAGTGGCG TTCGTGGTAG GCGCGGTGAT CCTGATAGAC ACCGACGCCC CCGGCTTTGG CATTCCGTTG GGGTTGATCG CGAGCCTGGC AATGCTGTCG GCATTGTTGA TCGGTGGTGT GCTGGGCATG GCCCTCAAAG CTCGCAAGCG AGCCTTGGTC AGCGGTGATG CCGGCCTGGT AGGCAGCTTG GTGACCGTCA CTCAGGTGGT GGCAGGCAAT CCGTTCTGTG GCGCGGTAAT GGCCCAGGGC GAACAATGGC AGGTCCAGTG CACTACGCCC TTGCAGCTCG GCCAGCAGGT GCGGGTCACC GCGCGTCATG GCGTGATGCT CGAAGTGAGC GCTGCTGCCC CTACAGCGCA AGGAGAATGA
|
Protein sequence | MIARCWRWWL LVLMLGFAPG SQAAPGAIWV LSIDDAIGPA SADYLMRGLD QAREQGAQLV VIRMDTPGGL DSAMRQIIKV ILASPVPVAT FVAPGGARAA SAGTYILYAS HVAAMAPGTN LGAATPVQVG SPTGAPKDDK AKNDTNEQAL ARKQVNDAAA YIRGLAQLRG RNADWAEKAV REAVSLSASE AFKQKVIDHV ANDLPDLLRQ LDGKTLIAAD QPRQLQTRDA SLVEHVPDWR TRLLAVITNP SVALILIMIG VYGLLFEFMN PGSGVGGVVG GICLLLALYA LQLLPVSFAG VALVMLGIAF MIAEAFLPSF GVVGFGGIVA FVVGAVILID TDAPGFGIPL GLIASLAMLS ALLIGGVLGM ALKARKRALV SGDAGLVGSL VTVTQVVAGN PFCGAVMAQG EQWQVQCTTP LQLGQQVRVT ARHGVMLEVS AAAPTAQGE
|
| |