| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0231 |
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| Symbol | |
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| ID | 6109010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 245128 |
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| End bp | 246120 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641619987 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001747106 |
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| Protein GI | 170719418 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4566] Response regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.523638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.456368 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGAT TAGGCAATGC CCAAGTATCG TTGGAGCGGC GAGAAGCCTT TGTCGACGGC
AAGCCGGTCC CATTGGGTGG GCGCGCGTTC GAGGTACTGG CCACTTTGAT CAAGGCCAAG
GGCCGCGTGG TCGGCAAGGA CGAGCTGTTC AGCGAGGTCT GGGCGGGCAC GGTGGTTGAA
GACAACAACC TGCAGGTGCA GATCTCTTTG CTGCGCAAAG CCTTTGGCGC CCCGGGTCTG
ATCCAGACGG TACCACGCCG AGGCTACCGG CTGGCTGTCG ACGTTGTCCT AGATCTGCCA
TGCACTGCGC TGGGTAGATC GCCCTTGAAG GATGCGGCAG AGGCCCTCGT GCCTCTGGGC
GACAGTGCGA GCGTACCGGT GCTCGTGGTG GATGACGACC CGTCGGTGCG CAAGGCTCTG
GCGCGGCTGT TCCGTTCGCA GGATATCGCG CATCGGTTGT ATGCCTCGGC CGAAGAATTG
TTCGAAGGCC AGGTCGAAAC GCCCTACGCG TGCCTGTTGC TGGACATGAA CCTACCGGAG
GCCAGCGGGC TGGAGGTTCA GGATGTGCTG CGTCGTCTCG ACCTGCCCTG GCCGATCATC
TTCATGACCG GTTACGGCAC CATCCCCCTG ACGGTGCAAG CCATGCGCGC AGGTGCGGTG
GAGTTTCTGA CCAAGCCCTT TGACGAAGAC CAGTTGCTGG CGGTACTCGA CGCTGCGCGC
GCACGTGCCC TGGTGCAAGG TCGCAAATGG CATCAAGCGC GGCAGGTGAA GCAGAAATAC
CAGCGCCTTA CCCAGCGTGA GCGCCAGGTG TTCTCGTTGG TGGTCGATGG CCTTTCGCAC
AAGCAGATTG CCAAGCAGAT CGGCACCAGT GAGGTGACGA CCAAGGTCCA CAAGAAGAAC
ATCATGAACA AGATGCAGTC CCGCTCACTG GTCGAACTGG TAGCCATGCA CCACGTCATC
GAATCGCGTG TCGAGGGCCA GGGCCCGGCA TGA
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| Protein sequence | MIRLGNAQVS LERREAFVDG KPVPLGGRAF EVLATLIKAK GRVVGKDELF SEVWAGTVVE
DNNLQVQISL LRKAFGAPGL IQTVPRRGYR LAVDVVLDLP CTALGRSPLK DAAEALVPLG
DSASVPVLVV DDDPSVRKAL ARLFRSQDIA HRLYASAEEL FEGQVETPYA CLLLDMNLPE
ASGLEVQDVL RRLDLPWPII FMTGYGTIPL TVQAMRAGAV EFLTKPFDED QLLAVLDAAR
ARALVQGRKW HQARQVKQKY QRLTQRERQV FSLVVDGLSH KQIAKQIGTS EVTTKVHKKN
IMNKMQSRSL VELVAMHHVI ESRVEGQGPA
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