| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4943 |
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| Symbol | slt |
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| ID | 6144401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 5057620 |
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| End bp | 5059557 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641619746 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_001746850 |
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| Protein GI | 170679874 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.996707 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAAAAAG CCAAACACGT TACCTGGCGG CTGTTGGCTG TCGGTGTCTG TCTGCTGACG
GTCAGCAGCG TGGCGCGAGC CGACTCACTG GATGAGCAGC GTAGCCGTTA CGCGCAAATT
AAGCAGGCCT GGGATAATCG ACAAATGGAT GTGGTCGAAC AAATGATGCC TGGATTGAAG
GATTATCCAC TTTATCCCTA TCTGGAATAC CGCCAGATCA CCGATGACCT GATGAATCAA
CCGGCGGTGA CGGTCACTAA CTTTGTTCGC GCTAACCCCA CGCTTCCTCC CGCTCGCACG
CTGCAATCTC GTTTCGTCAA TGAACTGGCG CGGCGTGAAG ACTGGCGTGG CTTGTTAGCC
TTTAGCCCGG AAAAACCCGG AACTACCGAA GCGCAATGTA ATTACTACTA TGCGAAATGG
AACACCGGGC AGAGTGAAGA AGCCTGGCAA GGGGCGAAAG AGCTGTGGCT AACCGGCAAG
AGCCAGCCTA ACGCCTGTGA CAAGTTATTT AGCGTCTGGC GTGCGTCAGG TAAACAAGAT
CCGCTGGCGT ATTTAGAGCG TATCCGTCTG GCGATGAAAG CGGGTAACAC CGGCCTGGTA
ACAGTGCTGG CAGGGCAGAT GCCTGCCGAT TACCAGACTA TCGCTTCGGC AATCATTTCA
CTGGCGAACA ACCCTAATAC GGTACTGACC TTCGCGCGTA CAACCGGCGC GACCGATTTT
ACCCGTCAAA TGGCGGCGGT GGCGTTTGCC AGCGTGGCGC GGCAGGATGC TGAAAATGCA
CGGCTGATGA TTCCATCGCT TGCTCAGGCA CAGCAGCTTA ATGAAGATCA GATTCAGGAA
CTGCGCGATA TCGTCGCCTG GCGTTTGATG GGCAACGATG TCACCGACGA ACAGGCGAAA
TGGCGTGATG ACGCCATTAT GCGTTCGCAA TCTACTTCGC TTATTGAACG CCGTGTGCGA
ATGGCGCTTG GCACCGGCGA TCGTCGCGGC CTGAATACCT GGCTGGCGCG TCTGCCGATG
GAGGCGAAAG AGAAAGATGA ATGGCGTTAC TGGCAGGCGG ATTTACTGCT TGAACGCGGA
CGTGAAGCTG AAGCAAAAGA GATTTTGCAT CAACTCATGC AACAGCGTGG TTTCTACCCG
ATGGTTGCTG CACAACGCAT CGGCGAAGAG TATGAGCTGA AGATTGATAA AGCGCCGCAG
AATGTTGACA GCGCCCTGAC TCAGGGGCCG GAGATGGCGC GCGTGCGCGA GTTGATGTAC
TGGAATCTCG ATAACACCGC GCGTAGCGAG TGGGCCAATC TGGTGAAGAG CAAGTCAAAA
ACAGAGCAGG CGCAACTGGC GCGGTATGCT TTCAATAACC AATGGTGGGA TCTCAGCGTT
CAGGCAACGA TCGCCGGGAA GCTGTGGGAT CATCTGGAAG AGAGATTCCC GCTGGCTTAC
AACGATCTTT TCAAACGTTA CACCAGTGGG AAGGAGATCC CGCAAAGCTA TGCGATGGCG
ATTGCCCGTC AGGAGAGTGC CTGGAATCCG AAAGTGAAAT CGCCGGTAGG AGCCAGCGGC
CTGATGCAGA TTATGCCGGG TACAGCGACC CATACGGTGA AGATGTTCTC TATTCCCGGT
TATAGCAGCC CTGGGCAATT GCTGGATCCG GAAACAAACA TCAACATTGG CACCAGTTAC
CTGCAATATG TTTATCAGCA GTTTGGCAAT AACCGTATTT TCTCCTCAGC AGCTTATAAC
GCCGGACCAG GGCGGGTGCG AACCTGGCTT GGCAACAGCG CAGGGCGTAT CGACGCAGTG
GCATTTGTCG AGAGTATTCC ATTCTCCGAG ACGCGCGGTT ATGTGAAAAA CGTGCTGGCT
TATGACGCTT ACTACCGCTA TTTCATGGGG GATAAACCGA CGTTGATGAG CGCCACGGAA
TGGGGACGTC GTTACTGA
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| Protein sequence | MEKAKHVTWR LLAVGVCLLT VSSVARADSL DEQRSRYAQI KQAWDNRQMD VVEQMMPGLK
DYPLYPYLEY RQITDDLMNQ PAVTVTNFVR ANPTLPPART LQSRFVNELA RREDWRGLLA
FSPEKPGTTE AQCNYYYAKW NTGQSEEAWQ GAKELWLTGK SQPNACDKLF SVWRASGKQD
PLAYLERIRL AMKAGNTGLV TVLAGQMPAD YQTIASAIIS LANNPNTVLT FARTTGATDF
TRQMAAVAFA SVARQDAENA RLMIPSLAQA QQLNEDQIQE LRDIVAWRLM GNDVTDEQAK
WRDDAIMRSQ STSLIERRVR MALGTGDRRG LNTWLARLPM EAKEKDEWRY WQADLLLERG
REAEAKEILH QLMQQRGFYP MVAAQRIGEE YELKIDKAPQ NVDSALTQGP EMARVRELMY
WNLDNTARSE WANLVKSKSK TEQAQLARYA FNNQWWDLSV QATIAGKLWD HLEERFPLAY
NDLFKRYTSG KEIPQSYAMA IARQESAWNP KVKSPVGASG LMQIMPGTAT HTVKMFSIPG
YSSPGQLLDP ETNINIGTSY LQYVYQQFGN NRIFSSAAYN AGPGRVRTWL GNSAGRIDAV
AFVESIPFSE TRGYVKNVLA YDAYYRYFMG DKPTLMSATE WGRRY
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