Gene EcSMS35_4846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4846 
SymbolfimG 
ID6146096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4952908 
End bp4953411 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content53% 
IMG OID641619650 
Productprotein fimG 
Protein accessionYP_001746757 
Protein GI170681547 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATGGC GCAAACGTGG GTATTTATTG GCGGCAATGT TGGCGTTCGC AAGTGCGACG 
ATACAGGCAG CCGATGTCAC CATCACGGTG AACGGTAAGG TCGTCGCCAA ACCGTGCACA
GTTTCCACCA CCAATGCCAC GATTGATCTC GGCGATCTTT ATTCTTTCAG TCTCGTGTCT
GCCGGTGCGG CATCGGCCTG GCATGATGTT GCGCTTGAGT TGACTCATTG TCCGGTGGGA
ACGTCGAGGG TCACTGCCAG CTTCAGCGGG GCAGCCGACA GTACCGGATA TTATAAAAAC
CAGGGGACCG CGCAAAACAT CCAGTTAGAG CTACAGGATG ACAGTGGCAA CACATTGAAT
ACTGGCGCAA CCAAAACAGT GCAGGTGGAT GATTCCTCAC AATCAGCGCA CTTCCCGTTA
CAGGTCAGAG CATTGACGGT AAATGGCGGA GCCACTCAGG GAACCATTCA GGCAGTGATT
AGCATCACCT ATACCTACAG CTGA
 
Protein sequence
MKWRKRGYLL AAMLAFASAT IQAADVTITV NGKVVAKPCT VSTTNATIDL GDLYSFSLVS 
AGAASAWHDV ALELTHCPVG TSRVTASFSG AADSTGYYKN QGTAQNIQLE LQDDSGNTLN
TGATKTVQVD DSSQSAHFPL QVRALTVNGG ATQGTIQAVI SITYTYS