Gene EcSMS35_4793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4793 
Symbol 
ID6145641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4884378 
End bp4885109 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content50% 
IMG OID641619600 
Producthypothetical protein 
Protein accessionYP_001746707 
Protein GI170680816 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.2342 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAAC CAATACACAA TGCTTACTGG TTATCCCGTT TTGAAAGTAT TCTCAACGGT 
GCCCTGGCGC AACACCGTGC CGTCTCGTTA ATCCGGGTGG ATTTACGTTT CCCTGAGTAT
ATGCCTGCCA CCATCATGGA TACCGATTTA GATTCAGCGG TGATTTCTCG TTTTTTTGCA
TCCCTGAAAG CAAAAATTCA GGCTTACCAG CGGAAAAAAC GACGTGCCAA CAAGCGTGTG
CGTGCAACCA CTCTGCGTTA TTTCTGGTGT CGGGAGTTTG GCAAGGAAAA AGGCAGGAAA
CATTATCACG TGATATTACT GCTCAACAAA GATACCTGGT GCTCGCCAGG GGATTTCACC
GTTCCTTCTT CGCTGGCGAC GCTGATCCAA CTGGCATGGT GCAGTGCTCT GCATCTTGAG
CCCTGGCAGG GTAATGGACT GGTTCATTTT TCCAGGCGGA CGCCTTTCCG TAAACCGACA
TCATCTGATG CTCGCCCTTC TTCCGATGAT ACGCCTGTGC CTGGTGGATG TTCTGATACC
CGGAAGGATT CTGACAAAAA ATCTGGTGGA TCCGCTGTTC TCTGGGTCAA GCGTGGTGAT
GTGGAAGCGA TGCAGAAAGC CATGGAGAGA GCCCGTTATC TCGTGAAGTA TGAGACGAAG
CAGCATGACG GTTCTGGTCA ACGTAATTAT GGTTGCAGTC GTGGGCTGGG GCGTCTACTG
GATGGCAGGT GA
 
Protein sequence
MNQPIHNAYW LSRFESILNG ALAQHRAVSL IRVDLRFPEY MPATIMDTDL DSAVISRFFA 
SLKAKIQAYQ RKKRRANKRV RATTLRYFWC REFGKEKGRK HYHVILLLNK DTWCSPGDFT
VPSSLATLIQ LAWCSALHLE PWQGNGLVHF SRRTPFRKPT SSDARPSSDD TPVPGGCSDT
RKDSDKKSGG SAVLWVKRGD VEAMQKAMER ARYLVKYETK QHDGSGQRNY GCSRGLGRLL
DGR