Gene EcSMS35_4668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4668 
SymbolulaE 
ID6144398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4767628 
End bp4768482 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content56% 
IMG OID641619484 
ProductL-xylulose 5-phosphate 3-epimerase 
Protein accessionYP_001746592 
Protein GI170680928 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3623] Putative L-xylulose-5-phosphate 3-epimerase 
TIGRFAM ID[TIGR00542] hexulose-6-phosphate isomerase, putative 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTCCA AACAAATCCC GCTTGGCATC TATGAAAAAG CGCTCCCCGC CGGGGAGTGC 
TGGCTGGAAC GGCTGCAACT GGCAAAAAAA TTAGGCTTCG ATTTTGTCGA GATGTCGGTA
GATGAAACTG ACGATCGCCT GTCGCGCCTC GACTGGAGCC GCGAGCAGCG TCTGGCGCTG
GTGAATGCGA TTGTTGAAAC CGGCGTGCGC GTGCCGTCCA TGTGCCTTTC TGCTCATCGT
CGTTTCCCGC TGGGCAGCGA AGATGACGCG GTACGGGCGC AGGGGCTGGA GATTATGCGT
AAAGCTATCC AGTTCGCCCA GGACGTTGGC ATTCGCGTAA TCCAACTGGC GGGCTATGAC
GTTTACTATC AGGAAGCCAA TAACGAAACG CGTCGTCGTT TCCGTGACGG CCTGAAAGAG
AGCGTTGAGA TGGCAAGCCG CGCGCAGGTG ACGCTGGCAA TGGAGATCAT GGATTATCCA
TTGATGAACT CCATCAGCAA GGCGCTGGGC TATGCGCACT ATCTCAACAA CCCGTGGTTC
CAGCTCTACC CGGATATCGG CAACCTGTCG GCGTGGGACA ACGACGTGCA GATGGAATTG
CAGGCCGGAA TTGGGCATAT CGTCGCGGTG CATGTGAAAG ACACCAAACC AGGCGTCTTC
AAAAATGTGC CGTTTGGCGA AGGCGTAGTG GATTTCGAAC GTTGCTTCGA AACGCTCAAA
CAGAGTGGCT ATTGCGGGCC GTACCTGATT GAGATGTGGA GCGAAACGGC GGAAGACCCG
GCAGCAGAAG TGGCGAAAGC GCGTGATTGG GTGAAAGCGC GCATGGCGAA AGCGGGCATG
GTGGAGGCGG CATAA
 
Protein sequence
MLSKQIPLGI YEKALPAGEC WLERLQLAKK LGFDFVEMSV DETDDRLSRL DWSREQRLAL 
VNAIVETGVR VPSMCLSAHR RFPLGSEDDA VRAQGLEIMR KAIQFAQDVG IRVIQLAGYD
VYYQEANNET RRRFRDGLKE SVEMASRAQV TLAMEIMDYP LMNSISKALG YAHYLNNPWF
QLYPDIGNLS AWDNDVQMEL QAGIGHIVAV HVKDTKPGVF KNVPFGEGVV DFERCFETLK
QSGYCGPYLI EMWSETAEDP AAEVAKARDW VKARMAKAGM VEAA