Gene EcSMS35_4286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4286 
Symbol 
ID6142909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4388181 
End bp4389236 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content45% 
IMG OID641619107 
Productputative lipoprotein 
Protein accessionYP_001746231 
Protein GI170683093 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGGA ATTTATTATC TTCCGCTATT ATAGTCGCCA TCATGGCCCT CGGTCTCACG 
GGTTGTGATG ATAAAAAAGC CGAAACAGAA ACGCCCCCGC CTGCCAATAG TCAACCTGCC
GCACCAGCTC CTGAAGCGAA ACCTGCTGAA GCTCCCGTTG CAAAAGCAGA AGTTAAACCT
GAAACTCCTG CCCAACCGGT GGTCGATGAA CAAGCGGTTT TCGACGAAAA AATGGATGTC
TATATCAAGT GCTACAACAA GTTACAGATC CCGGTACAGC GCAGTCTGGC GCGTTATGCT
GACTGGCTGA AAGATTTTAA ACAGGGGCCT ACCGGTAAAG AGAGTACTGT TTATGGCATC
TACGGCTTTA GTGAATCCAG CCTCGCTGAG TGTGAAAAAG GCGTAAAAAG TGCTGTGGCG
TTAACGCCTG CGCTGCAACC TATTGATGGC GTAGCGGTGA GTTATATCGA TGCTGCCGTG
GCGTTGGGTA ATACCATTAA CGAAATGGAT AAATATTACA CCCAGGAAAA TTATAAAGAC
GATGCGTTTG CGAAAGGGAA AACGCTGCAC CAGACATTCT TAAAAAATCT GGAAGCCTTT
GAACCTGTAG CCGAATCTTA TCATGCGGCG ATCCAGGAAA TTAATGATAA GCGTCAGCTT
GCGGAACTGA AAAATATTGA AGAAAGAGAA GGGAAAACAT TCCACTACTA TTCTCTGGCA
GTCATGATTT CAGCGAAACA AATTAATAAC CTGATATCGC AAGAGAAGTT TGATGTTGAT
GCGGCAATGA AGAAAGTGTC TGAACTGGAA ACGCTGGTGG CGCAGGCCAA AGAAGCGGAT
AAAGGCGGTA TGAATTTCTC GTTCATTAAT TCGGCAGACC AGTATCAACT CGAGGCTAAA
AAATATGTTC GCCGCGTCAG AGATAAAGTT CCGTATTCTG ACTGGGATAA AGAGCAACTT
CAGGATGCAA ACACAAGCTG GATGGTCGAC GACTCATTTC CACGAGCGTT ACGCGAGTAC
AACGAAATGG TCGATGACTA TAATAGCTTG CGTTAA
 
Protein sequence
MKRNLLSSAI IVAIMALGLT GCDDKKAETE TPPPANSQPA APAPEAKPAE APVAKAEVKP 
ETPAQPVVDE QAVFDEKMDV YIKCYNKLQI PVQRSLARYA DWLKDFKQGP TGKESTVYGI
YGFSESSLAE CEKGVKSAVA LTPALQPIDG VAVSYIDAAV ALGNTINEMD KYYTQENYKD
DAFAKGKTLH QTFLKNLEAF EPVAESYHAA IQEINDKRQL AELKNIEERE GKTFHYYSLA
VMISAKQINN LISQEKFDVD AAMKKVSELE TLVAQAKEAD KGGMNFSFIN SADQYQLEAK
KYVRRVRDKV PYSDWDKEQL QDANTSWMVD DSFPRALREY NEMVDDYNSL R