| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3773 |
|---|
| Symbol | |
|---|
| ID | 6147038 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 3836592 |
|---|
| End bp | 3836924 |
|---|
| Gene Length | 333 bp |
|---|
| Protein Length | 110 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641618599 |
|---|
| Product | HicB family protein |
|---|
| Protein accession | YP_001745739 |
|---|
| Protein GI | 170682114 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4226] Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.976848 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 62 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGATTG CCGGGCAACC TGCTGTTATC ACTTACGTGC CAGAACTGAA TGCATTTCGT
GGCAAATTCC TGGGCTTGTC AGGTTATTGT GATTTTGTCT CTGACAGCAT TCAGGGGCTG
CAAAAAGAAG GGGAGCTTTC CCTGCGAGAG TATCTTGAGG ATTGTAAAGC TGCGGGTATT
GAGCCGTATG CGCGTACAGA AAAGATTAAG ACCTTTACAT TACGCTATCC AGAATCGCTG
AGTGAACGCC TTAATAATGC GGCTGCGCAG CAACAAGTCT CTGTAAATAC TTATATTATT
GAAACGCTAA ATGAGCGTTT GAATCATTTA TAA
|
|---|
| Protein sequence | MEIAGQPAVI TYVPELNAFR GKFLGLSGYC DFVSDSIQGL QKEGELSLRE YLEDCKAAGI
EPYARTEKIK TFTLRYPESL SERLNNAAAQ QQVSVNTYII ETLNERLNHL
|
|---|
| |