| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3717 |
|---|
| Symbol | |
|---|
| ID | 6143927 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 3786095 |
|---|
| End bp | 3787297 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641618543 |
|---|
| Product | putative DNA protecting protein DprA |
|---|
| Protein accession | YP_001745683 |
|---|
| Protein GI | 170683496 |
|---|
| COG category | [L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
|---|
| TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTTT CAGCCAATGC ACAAGCGACC CTCCTGCTAA CCAGCGATTT TTCTCGCGCG
GCGGCGAGTG AGTATAAACC TCTTAGTAAT AGTGAATGGG GGAAGTTTGC ATTATGGCTG
AAGCACCAAC GTATCAGTCC CGCCGATCTT CTGGTGCCGC AACCGCAAGA GAAACTTACA
GGCTGGAGCG ATCCGCGTAT TTCTCAGGAG CGTATTCTTG GCTTGCTGGC GCGTGGTCAT
AGTTTGGCGT TGGCGGTAGA TAAGTGGCAA CGCGCCGGTT TATGGATCTT AACCCGCGGA
GATGCCGATT ATCCCGTTCG CTTGAAAAAC CGATTGCGAA CGGATGCACC TCCCGTTTTA
TTTGGCTGCG GGAATAAAGC ATTACTGCAA GCGGAAGGTA TGGCGATTGT TGGCTCGCGA
GATGCTCCGA CTGCCGATTT GCGCTATACC CAACAACTGG CAGCGAAACT GGCCCAACAG
GGGATTTGCG TTATCTCTGG TGGTGCGCGA GGTATTGATG AATGTGCAAT GGCGTCGGCA
CTGGAGGCCG GGGGAACTGC CGTTGGCGTA TTAGCTGATA GCTTGTTAAA AACGAGTACG
TTAGTGAAAT GGCGTGAAGG GCTTATAGCA GGCAACCTGG TGTTGATTTC GCCGTTTTAC
CCAGAGGTAC GTTTCACCGT CGGCAATGCG ATGGCGCGAA ATAAATATAT TTATTGCCTT
GCTGAAAGCG CAATGGTTGT ACGTGCGGGA ATGACCGGTG GAACGATAAC CGGGGCGATG
GAGGCATTAA AACATCAGTG GCTGCCTGTG CAGGTTAAAC CAAATCAGGA TATGCAATCA
GCCAATTCAC GATTAGTAGA AAATGGGGCG TCATGGAGTA CTGAACAGGC TGAGAATGTG
ACGTTCAGAC TGCCAGACGT TACTGGGCTG ATGTATGACA AAGCACTCCG TAACGCTCAA
CCAGAATTGT TTTCGCTGCA CGAAGATGAC GCAAATTACG CAGTGATGCC CTCGCATACC
CCTGTCGATT TTTATCAACT TTTTGTGGCG GAACTGGCGA TCCTTGCAAA GGAATCGATA
AGTATTGAAA GGCTGGCGTC TTGTACTGGT TTAACCATCG AACAAATTAG TGTGTGGCTG
AACCGCGCAG AAGAAGAGGG AAGGGTTATC CGATTGGGCG AAGGTCATTA TCAGTTCAGG
TAA
|
|---|
| Protein sequence | MNLSANAQAT LLLTSDFSRA AASEYKPLSN SEWGKFALWL KHQRISPADL LVPQPQEKLT
GWSDPRISQE RILGLLARGH SLALAVDKWQ RAGLWILTRG DADYPVRLKN RLRTDAPPVL
FGCGNKALLQ AEGMAIVGSR DAPTADLRYT QQLAAKLAQQ GICVISGGAR GIDECAMASA
LEAGGTAVGV LADSLLKTST LVKWREGLIA GNLVLISPFY PEVRFTVGNA MARNKYIYCL
AESAMVVRAG MTGGTITGAM EALKHQWLPV QVKPNQDMQS ANSRLVENGA SWSTEQAENV
TFRLPDVTGL MYDKALRNAQ PELFSLHEDD ANYAVMPSHT PVDFYQLFVA ELAILAKESI
SIERLASCTG LTIEQISVWL NRAEEEGRVI RLGEGHYQFR
|
|---|
| |