Gene EcSMS35_3487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3487 
SymbolyrbB 
ID6147281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3563576 
End bp3563869 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content54% 
IMG OID641618316 
ProductYrbB 
Protein accessionYP_001745463 
Protein GI170684008 
COG category[R] General function prediction only 
COG ID[COG3113] Predicted NTP binding protein (contains STAS domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.335495 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGT CACTGAGCTG GATGCAGACG GGTGACACGC TGGCGCTATC CGGAGAGCTG 
GATCAGGACG TTCTGCTACC GCTTTGGGAA ATGCGTGAGG AAGCGGTGAA GGGGATTACC
TGCATCGATC TTAGCCGTGT GTCCCGCGTG GATACGGGTG GACTGGCACT GCTGCTCCAT
CTTATCGATC TGGCGAAAAA GCAGGGCAAC AATGTGACGC TTCAGGGGGT AAACGACAAA
GTGTATACCC TCGCGAAATT GTATAATTTG CCTGCTGATG TTCTGCCTCG TTAA
 
Protein sequence
MSESLSWMQT GDTLALSGEL DQDVLLPLWE MREEAVKGIT CIDLSRVSRV DTGGLALLLH 
LIDLAKKQGN NVTLQGVNDK VYTLAKLYNL PADVLPR