Gene EcSMS35_3448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3448 
Symbol 
ID6143152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3526227 
End bp3526670 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content54% 
IMG OID641618278 
Producthypothetical protein 
Protein accessionYP_001745427 
Protein GI170682320 
COG category[S] Function unknown 
COG ID[COG3787] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACAC TCACCGCCAT CAGCCGTTGG CTGGCAAAAC AACATGTTGT CACCTGGTGT 
GTGCAGCAGG AAGGGGAACT GTGGTGCGCT AATGCCTTTT ATCTTTTTGA TGCGCAGAAA
GTCGCCTTCT ACATTTTGAC GGAAGAAAAA ACGCGCCACG CGCAGATGAG TGGGCCGCAG
GCGGCAGTTG CCGGAACGGT AAACGGTCAG CCGAAAACGG TAGCGTTAAT TCGCGGCGTG
CAATTTAAAG GCGAGATCCG CAGGCTTGAA GGTGAGGAAA GCGAGCGTGC GCGCCAGGCG
TACAATCGTC GCTTTCCGGT TGCCAGAATG CTGTCGGCAC CGGTGTGGGA AATCCGGCTT
GATGAAATCA AATTCACCGA CAACACGCTG GGCTTTGGTA AAAAAATGAT CTGGCTACGT
AACTCAGGCA CCGAGCAGGC GTAA
 
Protein sequence
METLTAISRW LAKQHVVTWC VQQEGELWCA NAFYLFDAQK VAFYILTEEK TRHAQMSGPQ 
AAVAGTVNGQ PKTVALIRGV QFKGEIRRLE GEESERARQA YNRRFPVARM LSAPVWEIRL
DEIKFTDNTL GFGKKMIWLR NSGTEQA