| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3387 |
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| Symbol | |
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| ID | 6143432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3472403 |
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| End bp | 3475087 |
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| Gene Length | 2685 bp |
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| Protein Length | 894 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641618216 |
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| Product | hypothetical protein |
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| Protein accession | YP_001745365 |
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| Protein GI | 170682266 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAAA AATTACTGGC TCTTTTGATC CTGGCGAGTC TCAGCCCGGC AAAGGCAACA
TTAACAAAAA TTCCCGCTGG TTTTGAGGTT ATTGCTCAGG GACAGCAGGA GTATATCGAG
GTTTATTTTG CAGGGAAAAG TCTCGGTAAA TATTATGCGA TGGTTAATCT TGATACCGTA
ACCTTTCTTG ATTCATCAAG TTTATACAGC AAACTTGAAT TGAGCACTGA CGATCAAAAA
ATCGCTCATA CAGTGAAAGA AAAACTATCG CAACCCTTAG CTCGCCACGG TGAACTGGCT
TGTGGTTTTG TACGTACTGA TTCAGGATGC GGTTTTCTTA ATACTGAGAC AGTAGAAATA
ATCTACAATG ATGAAGAAAG TTCAGCAACG CTATTTCTTA ATCCGCAATG GAGTTCTGCG
TTTAACTCGA AGTCATTGTA TTTAAATCCA GACAAAAATA CGGTTAACGC TTTTATACAT
CAGCAAGATA TTAATGTGCT GGTACAGGAT GATTACCAAT CGTTGTCAAT TCAGGGTAAT
GGCGCACTGG GAATAACAGA AAATAGCTAT ATTGGTGCGC ACTGGAATTT CGACGGTTAT
GATGCAGATG ATGTCAGCGA CAACAATGTC GATGTCAGCG ATCTCTATTA CCGCTATGAT
TTTTTACGCC GTTATTATGT GCAGGCGGGG CGGATGGACA ACCGCACATT ATTTAATGCG
CAAGGTGGAA ACTTTACTTT TAACTTTCTG CCACTCGGTG CCATCGACGG AATGCGTATC
GGGTCGACTC TCAGTTATTT AAACCAGACG CAAAGCCAGC AGGGAACGCC GGTAATGATC
CTGCTTTCGC GCAATTCTCG TGTTGATGCT TATCGTAATG AACAACTGTT GGGATCGTTT
TACCTCAATA GTGGTTCGCA ATTTATTGAT ACCAGTTCCT TTCCGCCAGG CAGCTACAGC
GTGGCGTTAA AAGTTTATGA AAATAACCAA CTCACCCGCA CCGAGCTTGT ACCGTTTACC
AAAACCGGCG GTCTGACAGA CGGAAATGCC CAGTGGTTCT TGCAGGCAGG TAAAACCACA
TCACAGGTTT CTGATGATGA AAGTTCTGCT TATCAGCTAG GCGTACGCCT GCCATTACAT
CCGCAATATG AGCTCTACGC AGGGCTGGCG AATGCCGATG ATGTAAGTGC TTTCGAGTTA
GGCAATAACT GGACGGCAGA TTTAGGCGGG GCGGGGAATC TGGCTATCAG TGCCAGCGTG
TTCCGTAACG ATGACGGCGG CAAAGGCGAT ATGCAACAGG CCAACTGGAG TCATCCGGGA
TGGCCGACGT TGGGCTTTTA TCGGACCAAC TCTGACGGTG ATGCTTGTAC AACCGACAAC
AGAGAGAGCT ACAACGCCTT AAGCTGTTAT GAAAGTATTT CCGCGACGGT TTCACAGAAT
TTTGTCGGCT GGAATATGAT GCTGGGTTAT ACCCGCACAC AAAATAACAC TGATGATAGT
TTGCGCTGGG ACAAACAGCA GAGCTTTGAA AATAACTATC TTCGCCAGAC TTCGGCTCAA
AGCATTTCCG AGACCGTACA ACTTAGCGCT TCTCGCGCTT TTGTGATGCG TGACTGGATT
TTGAGTACTT CCCTTGGGGT TTTCCATCGT AATGACAACG GCGGTGGTAG CGATGACAAC
GGTTTGTATC TGTCGTTTTC GTTATCTGAT ACGCCGACGA TGGACAGCAA TAACAACAGC
CATTCAACCA ATGTTTCTAC TGATTATCGT TATAGCGATC AGGATGGCGA TCAAACGTCA
TGGCAGTTAT CGCATACCTT TTATAACGAC TCATTCAGCC ATAAAGAGCT TGGCGTGACC
GTCGGCGGTT TGAACACCGA TACCATAAAC AGCGCGGTTA ACGGGCGTTG GGATGGCCAA
TATGGAAATG TCTACGCTAC TGTCTCAGAC AGTTATGATC GCCAGAACCA TGATCATCTC
TCGGCCTTCA CCGGGACATA CAGCTCCACG CTGGCGGTGA GTCGCTATGG CATCAATTTG
GGGGCCAGCG GCTCAGATGA TTTGCTGGGA GCGGTGTTGG TGGATGTGAA AGGTTTCTCT
GAACAGGATG AACAGAGTCA GGGTCTGCAA CTCGAAGCGC GGGTGGCTGG CAGCAGAACA
TTGCAGCTTG GTCAAAGCGA CAGCGTGTTA TTCCCCTATC CTGGATTTCA GTCTGGCTTT
GTTGAAGTTA ACGACAGTAA TCAGGGTAAC CAGCAAGGAA CAACCAACAT CATTAACGGT
GCGGGAAATC GTGAGTTAAT GCTGTTGCCG GGCAAATTAC GTTATCGCGA AGTGTCTGCC
AGTTTTAATT ACAACTATAT TGGTCGTTTG TTATTGCCCG CATCGGTAGA GAAATTCCCG
CTGGTGGGTC TGAATAGCGC CATGTTACTG GTGGCTGAAG ATGGCGGATT CACACTTGAG
ATCAGCAGTG GTGAAAAAGA GTTGTATCTG CTTTCCGGGC AGCAGTTCCT GAAATGTCCG
CTGAATGTTT TGAAGAAACG CGCCAGCATT CGCTATAGCG GGGATGTGAA TTGTAGCGTG
GTGAGTTATT CACAATTGCC GGAATCTATT CAGGTTCAGG CACAGTTGAA ACAGCCTAAA
TTACGTGGAA ACGTCCAGAC GGCGCAAAGG GAGGTTGCAC CATGA
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| Protein sequence | MDKKLLALLI LASLSPAKAT LTKIPAGFEV IAQGQQEYIE VYFAGKSLGK YYAMVNLDTV
TFLDSSSLYS KLELSTDDQK IAHTVKEKLS QPLARHGELA CGFVRTDSGC GFLNTETVEI
IYNDEESSAT LFLNPQWSSA FNSKSLYLNP DKNTVNAFIH QQDINVLVQD DYQSLSIQGN
GALGITENSY IGAHWNFDGY DADDVSDNNV DVSDLYYRYD FLRRYYVQAG RMDNRTLFNA
QGGNFTFNFL PLGAIDGMRI GSTLSYLNQT QSQQGTPVMI LLSRNSRVDA YRNEQLLGSF
YLNSGSQFID TSSFPPGSYS VALKVYENNQ LTRTELVPFT KTGGLTDGNA QWFLQAGKTT
SQVSDDESSA YQLGVRLPLH PQYELYAGLA NADDVSAFEL GNNWTADLGG AGNLAISASV
FRNDDGGKGD MQQANWSHPG WPTLGFYRTN SDGDACTTDN RESYNALSCY ESISATVSQN
FVGWNMMLGY TRTQNNTDDS LRWDKQQSFE NNYLRQTSAQ SISETVQLSA SRAFVMRDWI
LSTSLGVFHR NDNGGGSDDN GLYLSFSLSD TPTMDSNNNS HSTNVSTDYR YSDQDGDQTS
WQLSHTFYND SFSHKELGVT VGGLNTDTIN SAVNGRWDGQ YGNVYATVSD SYDRQNHDHL
SAFTGTYSST LAVSRYGINL GASGSDDLLG AVLVDVKGFS EQDEQSQGLQ LEARVAGSRT
LQLGQSDSVL FPYPGFQSGF VEVNDSNQGN QQGTTNIING AGNRELMLLP GKLRYREVSA
SFNYNYIGRL LLPASVEKFP LVGLNSAMLL VAEDGGFTLE ISSGEKELYL LSGQQFLKCP
LNVLKKRASI RYSGDVNCSV VSYSQLPESI QVQAQLKQPK LRGNVQTAQR EVAP
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