| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3353 |
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| Symbol | ttdR |
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| ID | 6142651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3430842 |
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| End bp | 3431774 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641618182 |
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| Product | transcriptional activator TtdR |
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| Protein accession | YP_001745332 |
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| Protein GI | 170682678 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.577142 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGAATA GCTGGCCTTT AGCCAAAGAT TTGCAGGTAC TGGTAGAAAT CGTCCACAGC
GGGAGTTTTA GCGCCGCAGC GGCGACGCTT GGGCAGACGC CTGCATTTGT CACCAAGCGG
ATCCAAATCC TTGAAAATAC GCTGGCAACA ACGCTGCTGA ACCGCTCCGC TCGCGGCGTG
GCGCTGACTG AAAGTGGCCA ACGTTGTTAC GAGCATGCGC TGGAAATCCT CACCCAATAT
CAGCGACTGG TCGATGACGT CACGCAAATC AAAACGCGCC CGGAGGGGAT GATTCGTATT
GGTTGCAGTT TTGGTTTTGG GCGCAGCCAT ATTGCGCCAG CCATTACCGA ACTGATGCGC
AATTATCCTG AGTTACAGGT GCATTTTGAA TTGTTCGATC GGCAAATTGA TTTAGTGCAG
GATAATATTG ATCTGGATAT TCGTATTAAT GACGAAATTC CTGATTATTA TATTGCGCAT
CTGTTAACGA AAAATAAAAG AATATTATGC GCAGCACCTG AGTATCTGCA AAAATATCCG
CAGCCACAAT CCTTACAGGA ATTAAGTCGT CATGATTGTC TGGTGACCAA AGAGCGCGAT
ATGACCCACG GAATATGGGA GTTGGGGAAC GGTCAGGAGA AAAAATCGGT GAAGGTAAGC
GGGCATCTTT CCTCCAATAG CGGCGAGATA GTGTTGCAAT GGGCGCTGGA GGGCAAAGGG
ATTATGTTGC GTTCCGAGTG GGATGTGTTG CCGTTTCTGG AGAGTGGCAA ACTGGTGCGA
GTATTGCCGG AGTATGCACA AAGCGCCAAT ATCTGGGCTG TTTACCGGGA GCCGCTCTAT
CGCAGCATGA AATTACGTGT CTGCGTGGAA TTTCTGGCGG CATGGTGCCA GCAACGGCTG
GGCAAGCCCG ACGAAGGCTA TCAGGTCATG TAA
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| Protein sequence | MLNSWPLAKD LQVLVEIVHS GSFSAAAATL GQTPAFVTKR IQILENTLAT TLLNRSARGV
ALTESGQRCY EHALEILTQY QRLVDDVTQI KTRPEGMIRI GCSFGFGRSH IAPAITELMR
NYPELQVHFE LFDRQIDLVQ DNIDLDIRIN DEIPDYYIAH LLTKNKRILC AAPEYLQKYP
QPQSLQELSR HDCLVTKERD MTHGIWELGN GQEKKSVKVS GHLSSNSGEI VLQWALEGKG
IMLRSEWDVL PFLESGKLVR VLPEYAQSAN IWAVYREPLY RSMKLRVCVE FLAAWCQQRL
GKPDEGYQVM
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