| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3317 |
|---|
| Symbol | ygiN |
|---|
| ID | 6146780 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 3394411 |
|---|
| End bp | 3394725 |
|---|
| Gene Length | 315 bp |
|---|
| Protein Length | 104 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641618146 |
|---|
| Product | quinol monooxygenase YgiN |
|---|
| Protein accession | YP_001745296 |
|---|
| Protein GI | 170681782 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1359] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.0938653 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTACAG TAATCGCAGA AATCCGTACT CGTCCTGGTC AACATCACCG TCAGGCAGTG
TTGGATCAGT TTGCTAAAAT CGTTCCAACC GTACTGAAAG AAGAAGGTTG CCACGGCTAT
GCGCCAATGG TGGATTGCGC TGCTGGCGTG AGTTTCCAGT CTATGGCACC GGATTCTATC
GTGATGATTG AGCAGTGGGA AAGCATCGCG CATCTTGAAG CGCACTTGCA GACCCCGCAC
ATGAAAGCGT ACAGCGAGGC CGTAAAAGGC GATGTGCTGG AGATGAATAT CCGCATCCTG
CAACCGGGGA TTTAA
|
|---|
| Protein sequence | MITVIAEIRT RPGQHHRQAV LDQFAKIVPT VLKEEGCHGY APMVDCAAGV SFQSMAPDSI
VMIEQWESIA HLEAHLQTPH MKAYSEAVKG DVLEMNIRIL QPGI
|
|---|
| |