| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3183 |
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| Symbol | shiF |
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| ID | 6142947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3265340 |
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| End bp | 3266533 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641618023 |
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| Product | transport protein ShiF |
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| Protein accession | YP_001745173 |
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| Protein GI | 170683143 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCTA AGATCGAAGA TACGCCCCAA AAAACCCTGT CCTGCTGGCC ACTGGCGTTC
AGTGCCGGTC TTCTCGGTAT CGGACAGAAC GGTCTGCTGG TTGTACTCCC TGTTCTGGTC
ATACAGACAA ATCTGAGTCT GTCTGTATGG GCTGCCCTGC TGATGCTGGG CTCAATGCTG
TTTCTGCCAT CTTCCCCATG GTGGGGAAAG CAAATTTCCC TTACTGGCAG TAAGACTGTG
GTGCTGTGGG CTCTGGGAGG ATATGGCGTA AGCTTTACCC TGCTTGGGCT GGGAAGCGTG
CTGATGGCTA CCGGTGCCGT AACAAAAGCG GTGGGGTTGG GAATATTAAT CATCGCCCGG
ATCGTCTACG GTCTGACCGT GTCAGCAATG GTGCCAGCCT GTCAGGTCTG GGCATTGCAG
AGAGCGGGAG AAGGGAATCG CATGGCCGCT CTGGCAACCA TCAGCTCCGG CCTGAGCTGC
GGCAGGCTAT TCGGGCCGCT GTGCGCGGCG GCAATGTTGG TCATTCACCC TCTGGCGCCA
GTGTGGATGC TGATGGCAGC GCCAGCGCTG GCACTGGTGA TGCTTCTGCG GTTGCCCGGC
ACACCACCAC AGCCCACACC GGAGCGCAAG AGCGTCAGCC TGAAGCGGGA TTTCCTGCCT
TATCTGCTTT GCGCAATGTT ACTGGCTGCG GCAATGAGCA TGATGCAGCT TGGACTTTCG
CCAGCCCTTA CTCGCCAGTT CGCCACTGAT ACCACCACTA TTAGCCAACA GGTAGCGTGG
TTGTTGGGGC TGTCCGCAAT AGCTGCGCTT ATCGCGCAGT TCGTGGTACT CCGTCCACAG
CGCCTGACTC CAGTGGCTCT GCTCCTGAGT GCCGGGGTGT TGATGAGTAG TGGTCTGGCT
ATCATGCTCG CTGAACAGCT ATGGTTGTTT TACCTAGGCT GTGCAGTGCT GTCATTTGGA
GCTGCTCTGG CAACCCCCGC TTATCAACTT TTACTGAATG ATAAGCTGGC CGACGGCGCA
GGCGCGGGCT GGCTCGCTTG CAGTCACACA CTTGGCTATG GGCTTTGCGC GTTGTTGGTA
CCATTGGTGT CGAAAACAGG TGTCGCAATA GCACTGATTG TGATGGCATT ATTTGCCGCT
GTATTATTTA GCATGGTGAC TGTATTTATC TGGCGCTGCT GCAAAAGCAA GTAA
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| Protein sequence | MSSKIEDTPQ KTLSCWPLAF SAGLLGIGQN GLLVVLPVLV IQTNLSLSVW AALLMLGSML
FLPSSPWWGK QISLTGSKTV VLWALGGYGV SFTLLGLGSV LMATGAVTKA VGLGILIIAR
IVYGLTVSAM VPACQVWALQ RAGEGNRMAA LATISSGLSC GRLFGPLCAA AMLVIHPLAP
VWMLMAAPAL ALVMLLRLPG TPPQPTPERK SVSLKRDFLP YLLCAMLLAA AMSMMQLGLS
PALTRQFATD TTTISQQVAW LLGLSAIAAL IAQFVVLRPQ RLTPVALLLS AGVLMSSGLA
IMLAEQLWLF YLGCAVLSFG AALATPAYQL LLNDKLADGA GAGWLACSHT LGYGLCALLV
PLVSKTGVAI ALIVMALFAA VLFSMVTVFI WRCCKSK
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