| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3060 |
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| Symbol | |
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| ID | 6144830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3149691 |
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| End bp | 3150734 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641617929 |
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| Product | solute-binding family 7 protein |
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| Protein accession | YP_001745080 |
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| Protein GI | 170679959 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.591808 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.298604 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACTACC GACAATTACT CCCCTTTCTT TTATCAGGAT TTCTTCTGTT ATCTCCCTCG
ATTTTTGCTG CTGAAAAAAT TCTTCGTTAT ACAGACCATG AACCCTACGG GGGAATGCGT
ACACAAATAA TTAAAGAAAT ATTTTTTGCA GAAATTGAAA AAGAGTCGCA GGGGCGTTTG
AAAATCGAAC CACACTGGAA CGGTGAAACC GCCATCAGCT ATGACGCTCT GACGACAATA
AGCGATGGCA GCAAAGCTGA TATGGGTATA GTGGTGCCGG AATACACCGC GAAACAATTG
CCGCTTCATC AAATCTTCAA GAGCTTTGCT ATTGGCCCGG ATCATGGAGC CAGTCAGGTA
GAATTCTTTC GTCGCGTATA TGCGGAAATT CCCGAATTTA ACGCTGAACT TGAGCGTAAC
AATATCGTGA ATTTACAGTT TTTCCTTGGC TACCCGGTAG GCTTTTTCTC TACCAGGCCC
ATTGATAAAT TGACTGCGCT TCAGGGAACC ACCTGGCGAA CAGCCAGTTT CTGGCATCGG
GCTTATTTAA CTCATACGGG GGCAAAAACC GTAACTTTAC CGTGGAATGA TCAAATAACT
AAAGCACTCA TGGATGGAAA ACTGGATGGT TTAATGGTCA ATCTCGATAG CGGATATGAC
ATCCATGCTG AACGTGCTGC GCCGAATGTG TTGCTCTCAC CTTCTCTCTG GCTTGGTCAT
GTTTATCTGT TGGTAATGAA TAAACAATCG TGGGAAAACC TTGATAACAG AGATCGTGAG
GCTATTCAAC GAGCTGCCAT TACAACCGAG AAAGCACTGG GCAAGGCATT AGATAACAAC
CTGATCAGCA TGGTAAAAAC GCTTGAGCAG GAAGGTGCAC AGGTTCGCTA TCTGAAAAAA
TCAGGGCTGG ACGCCTGGCA GAAAGCGATC GGTTATCAGC AAGAACAAGC ACAGTGGGTA
GAAAAGCAAA ATAAGGAAGG CGTGGAGAAA GCCGGGGAAG TCATGCAAAA AGTTGCCAAT
ATACTCGATG AAACAATGCG TTAA
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| Protein sequence | MHYRQLLPFL LSGFLLLSPS IFAAEKILRY TDHEPYGGMR TQIIKEIFFA EIEKESQGRL
KIEPHWNGET AISYDALTTI SDGSKADMGI VVPEYTAKQL PLHQIFKSFA IGPDHGASQV
EFFRRVYAEI PEFNAELERN NIVNLQFFLG YPVGFFSTRP IDKLTALQGT TWRTASFWHR
AYLTHTGAKT VTLPWNDQIT KALMDGKLDG LMVNLDSGYD IHAERAAPNV LLSPSLWLGH
VYLLVMNKQS WENLDNRDRE AIQRAAITTE KALGKALDNN LISMVKTLEQ EGAQVRYLKK
SGLDAWQKAI GYQQEQAQWV EKQNKEGVEK AGEVMQKVAN ILDETMR
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