| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3048 |
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| Symbol | |
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| ID | 6143523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3137159 |
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| End bp | 3138055 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641617917 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001745068 |
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| Protein GI | 170680003 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00352203 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACT GGAATGATTA CTACTACTTT GCCCTGATTG CCGATGAAGG CAGCTACAGC
CAGGCGGCGC TGCGTGCGGG TGTGTCGAAA TCGGTATTAA GCCGTCGAAT GGCAGCGCTG
GAAGAGCGCC TCGGCGTGAG GCTTATTCAG CGAACTACGC GGCGTCTGGC CCTGACGGCG
GCAGGGGAAC AGTTTGCTGT CGAGTGTCGG GCGCTGGTGG CTCAGGGGGA ACGGGCCAGA
GCGGTGGTGA TGGCCGCCCA GGAAAGCCCA CAGGGAATGC TGCGCGTCAG CGCGCCGGTA
TTTATGGCTG AAACATGGTT TGGTGAGTTC GTCAGTGAAT TTATCGCCCG CTGGCCCTTG
GCGAAGGTGC AACTGCTGGC AATTAATCGC CCGGTGGATA TGGTCGCTGA AGGCATTGAT
ATTGCGCTGG TTACGGCTTC CGGCGCGCTT GCGGACTCGA CGCTGCATTA TAAAAAATTA
CATACCCAGG CTGATATTTT AGTTGCCAGT TCGCAGTGGC TGGCCCGCCA TCCGCAGGTG
AAGGCCATTG ACGATCTTAA CCGCGTCGAC GGGATCCTCC GCCTGACGAA CAATGGCGGG
AGCCAGTGGC AGTTAATGAA TGGCGACCAG GAGATTACGC TGCATCCCGA GGCGCGTTTG
CAGACAAATA ACATTCGCGT CATGTTGCAG GCAGTGCTTG GCGGGAATGG CGTGGCGTTA
TTGCCTCAAT TTGCCTGTAA ACAGGGGCTT GCCAACGGTG AACTGGTGCG CCTGTTCGCA
CCGTGGAGCG GCATACCCAG ACCGTTGTAT GCTTTATTTG CCGGGCGAAA GGGGATGCCC
GCCATTGCGC GATATTTTAT GGATGAGTTA ACCACGCGGC TTGCCAACGG GGTCTGA
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| Protein sequence | MIDWNDYYYF ALIADEGSYS QAALRAGVSK SVLSRRMAAL EERLGVRLIQ RTTRRLALTA
AGEQFAVECR ALVAQGERAR AVVMAAQESP QGMLRVSAPV FMAETWFGEF VSEFIARWPL
AKVQLLAINR PVDMVAEGID IALVTASGAL ADSTLHYKKL HTQADILVAS SQWLARHPQV
KAIDDLNRVD GILRLTNNGG SQWQLMNGDQ EITLHPEARL QTNNIRVMLQ AVLGGNGVAL
LPQFACKQGL ANGELVRLFA PWSGIPRPLY ALFAGRKGMP AIARYFMDEL TTRLANGV
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