| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3024 |
|---|
| Symbol | prfB |
|---|
| ID | 6146906 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 3113984 |
|---|
| End bp | 3115082 |
|---|
| Gene Length | 1099 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641617893 |
|---|
| Product | peptide chain release factor 2 |
|---|
| Protein accession | YP_001745044 |
|---|
| Protein GI | 170682178 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1186] Protein chain release factor B |
|---|
| TIGRFAM ID | [TIGR00020] peptide chain release factor 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 62 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGAAA TTAATCCGGT AAATAATCGC ATTCAGGACC TCACGGAACG CTCCGACGTT
CTTAGGGGGT ATCTTTGACT ATGACGCCAA GAAAGAGCGT CTGGAAGAAG TAAACGCCGA
GCTGGAACAG CCGGATGTCT GGAACGAACC CGAACGCGCA CAGGCGCTGG GTAAAGAGCG
TTCCTCCCTC GAAGCCGTTG TCGACACCCT TGACCAAATG AAACAGGGGC TGGAAGATGT
TTCTGGTCTG CTGGAACTGG CTGTAGAAGC TGACGACGAA GAAACCTTTA ACGAAGCCGT
TGCTGAACTC GACGCTCTGG AAGAAAAACT GGCGCAGCTT GAGTTCCGCC GTATGTTCTC
TGGCGAATAT GACAGCGCCG ACTGCTACCT CGATATTCAG GCGGGGTCTG GTGGTACGGA
AGCACAGGAC TGGGCGAGCA TGCTTGAGCG TATGTATCTG CGCTGGGCAG AATCGCGTGG
TTTCAAAACT GAAATCATCG AAGAGTCGGA AGGTGAAGTG GCGGGTATTA AATCCGTGAC
GATCAAAATC TCCGGCGATT ACGCTTACGG CTGGCTGCGT ACAGAAACTG GCGTTCACCG
CCTGGTGCGT AAGAGCCCGT TTGACTCCGG CGGTCGTCGC CACACGTCGT TCAGCTCCGC
GTTTGTTTAC CCGGAAGTTG ATGACGATAT TGATATCGAA ATCAACCCGG CGGATCTGCG
CATCGACGTT TATCGCGCGT CCGGCGCGGG CGGTCAGCAC GTTAACCGTA CCGAATCTGC
GGTGCGTATT ACCCACATCC CGACCGGGAT CGTGACCCAG TGCCAGAACG ACCGTTCCCA
GCACAAGAAC AAAGACCAGG CCATGAAGCA GATGAAAGCG AAGCTTTATG AACTGGAGAT
GCAGAAGAAA AATGCCGAGA AACAGGCGAT GGAAGATAAT AAATCTGATA TCGGCTGGGG
CAGCCAGATT CGTTCTTATG TCCTTGATGA CTCCCGCATT AAAGATCTGC GTACCGGGGT
AGAAACCCGC AACACGCAGG CCGTGCTGGA CGGCAGCCTG GATCAATTTA TCGAAGCAAG
TTTGAAAGCA GGGTTATGA
|
|---|
| Protein sequence | MFEINPVNNR IQDLTERSDV LRGYLDYDAK KERLEEVNAE LEQPDVWNEP ERAQALGKER
SSLEAVVDTL DQMKQGLEDV SGLLELAVEA DDEETFNEAV AELDALEEKL AQLEFRRMFS
GEYDSADCYL DIQAGSGGTE AQDWASMLER MYLRWAESRG FKTEIIEESE GEVAGIKSVT
IKISGDYAYG WLRTETGVHR LVRKSPFDSG GRRHTSFSSA FVYPEVDDDI DIEINPADLR
IDVYRASGAG GQHVNRTESA VRITHIPTGI VTQCQNDRSQ HKNKDQAMKQ MKAKLYELEM
QKKNAEKQAM EDNKSDIGWG SQIRSYVLDD SRIKDLRTGV ETRNTQAVLD GSLDQFIEAS
LKAGL
|
|---|
| |