| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2973 |
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| Symbol | ppdA |
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| ID | 6144943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3052338 |
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| End bp | 3052808 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641617842 |
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| Product | hypothetical protein |
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| Protein accession | YP_001744994 |
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| Protein GI | 170680414 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0237363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.00343665 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAAACAC AACGTGGTTA TACGCTGATT GAAACGCTGG TCGCGATGCT GATTCTGGTC
ATGCTAAGCG CAAGTGGGCT CTATGGCTGG CAATATTGGC AGCAGTCGCA ACGGCTTTGG
CAAACCGCCA GCCAGGCGCG GGACTATTTG CTCTATTTAC GTGAAGATGC CAACTGGCAT
AACCGCGACC ACAGTATCAG TGTTATCAGG GAGGGGACGT TATGGTGCCT TGTGAGTTCC
GCTGCTGGGG CCAATACCTG TCATGGCAGT TCACCATTGG TCTTTGTGCC ACGCTGGCCC
GAAGTCGAAA TGAGCGATCT GACACCTTCG CTTGCTTTCT TTGGCCTGCG CAATACCGCA
TGGGCCGGGC ATATTCGCTT CAAAAACTCA ACGGGCGAGT GGTGGCTGGT GGTTTCGCCG
TGGGGAAGAC TCCGGCTTTG TCAGCAAGGA GAAACAGAAG GATGCCTGTA A
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| Protein sequence | MKTQRGYTLI ETLVAMLILV MLSASGLYGW QYWQQSQRLW QTASQARDYL LYLREDANWH
NRDHSISVIR EGTLWCLVSS AAGANTCHGS SPLVFVPRWP EVEMSDLTPS LAFFGLRNTA
WAGHIRFKNS TGEWWLVVSP WGRLRLCQQG ETEGCL
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