| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2952 |
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| Symbol | csdE |
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| ID | 6144847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3027842 |
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| End bp | 3028285 |
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| Gene Length | 444 bp |
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| Protein Length | 147 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641617821 |
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| Product | cysteine desulfurase, sulfur acceptor subunit CsdE |
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| Protein accession | YP_001744976 |
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| Protein GI | 170681430 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2166] SufE protein probably involved in Fe-S center assembly |
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| TIGRFAM ID | [TIGR03391] cysteine desulfurase, sulfur acceptor subunit CsdE |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0280562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGAACC CGCAATTCGC CGGACATCCG TTCGGCACAA CCGTAACCGC AGAAACGTTA
CGCAATACCT TCGCACCGTT GTCGCAATGG GAAGATAAAT ATCGCCAGTT GATCATGCTG
GGGAAACAGC TGCCGGCTTT GCCAGACGAG TTAAAAGCGC AGGCTAAAGA GATTGCCGGA
TGCGAAAACC GCGTCTGGCT GGGATATACC ATGGCTGAAA ACGGCAAGAT GCATTTCTTT
GGCGACAGCG AAGGACGCAT TGTGCGCGGC CTGCTTGCGG TGTTGTTGAC TGCCGTTGAG
GGCAAAACCG CCGCCGAATT GCAGGCACAG TCGCCGCTGG CATTGTTTGA TGAGCTGGGA
TTGCGTGCGC AACTTAGCGC CTCACGCAGC CAGGGGTTGA ATGCGTTAAG CGAGGCGATT
ATCGCTGCGG CGAAGCAGGT TTAA
|
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| Protein sequence | MTNPQFAGHP FGTTVTAETL RNTFAPLSQW EDKYRQLIML GKQLPALPDE LKAQAKEIAG
CENRVWLGYT MAENGKMHFF GDSEGRIVRG LLAVLLTAVE GKTAAELQAQ SPLALFDELG
LRAQLSASRS QGLNALSEAI IAAAKQV
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