| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2730 |
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| Symbol | |
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| ID | 6143560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2809484 |
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| End bp | 2810365 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641617601 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001744766 |
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| Protein GI | 170683897 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.118271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTGC GCCGTTTTAT TACACTTAAA ACCGTGGTGG AAGAGGGTTC CTTTTTGCGA
GCTTCGCAAA AATTGTGCTG CACACAATCG ACGGTGACTT TTCATATTCA GCAGCTTGAG
CAGGAGTTCT CAGTCCAGTT ATTTGAGAAA ATTGGTCGAC GAATGTGCCT TACCCGCGAA
GGAAAAAAGC TGCTGCCGCA CATCTATGAA CTCACCAGAG TGATGGATAC CCTTCGTGAG
GCTGCCAAAA AAGAGTCGGA TCCGGACGGG GAACTACGCG TTGTTTCAGG CGAAACGTTG
CTTTCTTACC GAATGCCGCA GGTGTTGCAG CGTTTTCGGC AACGCGCACC AAAAGTGTGT
TTATCGTTGC AGTCTCTGAA CTGTTACGTG ATCCGTGATG CGCTACTGAA TGATGAGGCT
GATGTCGGCG TCTTTTACCG CGTAGGGAAT GATGATGCTC TGAACCGACG AGAGTTGGGT
GAACAATCGC TGGTGCTGGT AGCTTCACCG CAAATTGCAG ATGTCGATTT TACTGAGCCG
GGAAGACATA ACGCCTGTAG TTTTATTATC AATGAACCGC AATGTGTCTT CCGCCAGATA
TTTGAGAGCA CGCTGCGCCA GCGACGGATC ACGGTGGAAA ACACCATTGA GCTTATAAGT
ATCGAAAGCA TCAAGCGTTG TGTCGCGGCA AATATCGGGG TCAGTTACCT GCCGCGCTTT
ACAGTGGCAA ATGAACTTGC GAGTGGCGAA TTAATCGAAT TGCCTTTTGG CGAACAGTCG
CAGACCATTA CGGCAATGTG CGCTCACCAT GCCGGAAAAG CGGTTAGCCC GGCGATGCAC
ATTTTTATTC AGTGTGTTGA AGAGTGTTTT TTGCCGGGAT AA
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| Protein sequence | MDLRRFITLK TVVEEGSFLR ASQKLCCTQS TVTFHIQQLE QEFSVQLFEK IGRRMCLTRE
GKKLLPHIYE LTRVMDTLRE AAKKESDPDG ELRVVSGETL LSYRMPQVLQ RFRQRAPKVC
LSLQSLNCYV IRDALLNDEA DVGVFYRVGN DDALNRRELG EQSLVLVASP QIADVDFTEP
GRHNACSFII NEPQCVFRQI FESTLRQRRI TVENTIELIS IESIKRCVAA NIGVSYLPRF
TVANELASGE LIELPFGEQS QTITAMCAHH AGKAVSPAMH IFIQCVEECF LPG
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