| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2514 |
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| Symbol | dsdC |
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| ID | 6143590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2567502 |
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| End bp | 2568449 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641617386 |
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| Product | DNA-binding transcriptional regulator DsdC |
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| Protein accession | YP_001744557 |
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| Protein GI | 170681753 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | [TIGR02036] D-serine deaminase transcriptional activator |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACCCC TTCGTGAAAT AAGAAATCGA CTGCTTAACG GCTGGCAACT ATCAAAACTG
CATACTTTTG AAGTGGCTGC CAGGCATCAG TCCTTCGCCC TTGCGGCAGA GGAATTGTCG
CTGAGCCCCA GTGCGGTAAG TCACCGTATC AATCAGCTGG AAGAAGAATT AGGTATTCAG
TTGTTTGTTC GTTCCCATCG CAAAGTGGAA TTAACGCACG AGGGGAAACG CGTTTATTGG
GCGCTAAAAT CGTCGCTGGA TACCCTGAAC CAGGAAATTC TTGATATCAA AAATCAGGAA
TTATCGGGAA CGTTAACGCT GTATTCCCGG CCCTCTATCG CCCAATGCTG GTTGGTGCCC
GCATTAGGTG ACTTTACACG CCGATATCCG TCTATTTCGC TCACCGTGCT CACTGGTAAT
GACAATGTCA ATTTGCAACG TGCCGGAATC GATTTGGCGA TCTACTTTGA TGATGCGCCG
TCAGCGCAAT TGGCTCATCA CTTTCTGATG GATGAAGAAA TCTTGCCTGT ATGTAGCCCG
GAATACGCTC AAAGACATGC TTTAACCAAC CAGGTAATTA ACCTGCGCCA CTGTACGTTG
CTCCATGACA GACAGGCATG GAGCAACGAC TCCGGTACGG ATGAATGGCA TAGTTGGGCG
CAACATTATG CGGTTAATTT GCCGACATCT TCTGGGATTG GCTTTGATCG TTCTGATTTA
GCTGTTATCG CTGCGATGAA TCATATTGGG GTAGCGATGG GAAGAAAACG CCTGGTACAA
AAAAGGCTTG CCAGTGGTGA GCTCGTCGCG CCGTTTGGCG ATATGACGGT GAAATGCCAT
CAGCATTATT ACATCACCAC ATTACCGGGC AGGCAGTGGC CAAAAATTGA GGCATTTATT
ACTTGGTTAA GAGAACAGGT AAGTCAATAT GAATGTTATA CCTTATAA
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| Protein sequence | MEPLREIRNR LLNGWQLSKL HTFEVAARHQ SFALAAEELS LSPSAVSHRI NQLEEELGIQ
LFVRSHRKVE LTHEGKRVYW ALKSSLDTLN QEILDIKNQE LSGTLTLYSR PSIAQCWLVP
ALGDFTRRYP SISLTVLTGN DNVNLQRAGI DLAIYFDDAP SAQLAHHFLM DEEILPVCSP
EYAQRHALTN QVINLRHCTL LHDRQAWSND SGTDEWHSWA QHYAVNLPTS SGIGFDRSDL
AVIAAMNHIG VAMGRKRLVQ KRLASGELVA PFGDMTVKCH QHYYITTLPG RQWPKIEAFI
TWLREQVSQY ECYTL
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