| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2404 |
|---|
| Symbol | |
|---|
| ID | 6144182 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 2453113 |
|---|
| End bp | 2453655 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641617277 |
|---|
| Product | outer membrane protein, YfaZ |
|---|
| Protein accession | YP_001744449 |
|---|
| Protein GI | 170680698 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 60 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TTGCGCTAGC AGGTCTGGCC GGAATGCTGT TGGTTTCTGC ATCGGTCAAT
GCAATGAGCA TCAGCGGTCA GGCGGGTAAA GAATACACCA ATATTGGTGT CGGTTTTGGG
ACTGAATCGA CGGGCCTGGC GTTAAGCGGT AACTGGACAC ATAACGACGA CGACGGTGAC
GTCGCGGGCG TGGGGCTGGG GTTGAATCTG CCTCTCGGGC CGTTAATGGC GACCGTTGGC
GGAAAAGGCG TTTACACCAA CCCGAATTAC GGCGATGAAG GTTATGCCGC AGCGGTAGGA
GGTGGTTTGC AGTGGAAAAT TGGCAACAGT TTCCGTCTGT TTGGCGAGTA TTATTACTCC
CCGGATTCGC TCTCCAGCGG TATTCAAAGT TATGAGGAAG CGAATGCGGG CGCGCGTTAC
ACCATTATGC GTCCAGTCAG TATTGAGGCG GGCTATCGCT ACCTGAACCT TTCTGGTAAA
GACGGTAACC GCGACAACGC CGTGGCTGAC GGCCCGTATG TTGGGGTTAA CGCCAGTTTC
TGA
|
|---|
| Protein sequence | MKKIALAGLA GMLLVSASVN AMSISGQAGK EYTNIGVGFG TESTGLALSG NWTHNDDDGD
VAGVGLGLNL PLGPLMATVG GKGVYTNPNY GDEGYAAAVG GGLQWKIGNS FRLFGEYYYS
PDSLSSGIQS YEEANAGARY TIMRPVSIEA GYRYLNLSGK DGNRDNAVAD GPYVGVNASF
|
|---|
| |