Gene EcSMS35_2382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2382 
Symbol 
ID6142639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand+ 
Start bp2426298 
End bp2426996 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content36% 
IMG OID641617255 
ProductGntR family transcriptional regulator 
Protein accessionYP_001744427 
Protein GI170680188 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.672304 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.779059 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGATA AAGCGAAACG TGACTTAAGT CACATATCAA TTGAGATACC AAAATCCGTA 
ACACAGGTCA TCAAAGAAAA AATCAGGGAT ATGATAATTC ATGGCGATCT CAGTCTTGGG 
CAACCGATAA GTGAAAATGA ACTTTCGAAT ATTCTGGCGG TAAGTAAAAC ACCTATTCGT 
GAAGCTTTTA TTTTACTTAG TCACAATGAA AATCTGATCA ATATCATTCC ACGCAGCGGA 
ACATTCGTTT TTTCCGTAAC AGATAAAGAT ATTAATGACC TCATAAAAAT GCGAGTAATT 
CTGGAGCAGG GTGCAATTAG TGAAGCAATG GAAAAGAATG CAAACAATGT CATCATTGAA 
CTAAATAGTA TACTATCAAA ATCAGCAAAA ATTAATGCCG AGCGCGATAC TCAGGCTTAT 
CTTAAACTGG ATCATGATTT TCATTATGTG TTTGTTAAAT ACGCTGATAA TAAATACATC 
TCTCAGGCAC ACCAATTGAT ATCCGCACGT TTACTTGCTA TCCGTTATCG ACTGGATTTC 
ACTACGGAAT ATATCACCAA TTCAAATCGT GGCCATGCGA CTATTTTAGA TATGCTAAAA 
AATAATAACG TTGAAGGTGT TTGTAATTTT ATTACTCATC ACGTAAGTAG TGGATTTACC 
GAGCGCGCAC GAAAAATTCT CTCGTTATCT ACACAGTAA
 
Protein sequence
MRDKAKRDLS HISIEIPKSV TQVIKEKIRD MIIHGDLSLG QPISENELSN ILAVSKTPIR 
EAFILLSHNE NLINIIPRSG TFVFSVTDKD INDLIKMRVI LEQGAISEAM EKNANNVIIE 
LNSILSKSAK INAERDTQAY LKLDHDFHYV FVKYADNKYI SQAHQLISAR LLAIRYRLDF 
TTEYITNSNR GHATILDMLK NNNVEGVCNF ITHHVSSGFT ERARKILSLS TQ