| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2334 |
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| Symbol | rplY |
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| ID | 6146303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 2368177 |
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| End bp | 2368461 |
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| Gene Length | 285 bp |
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| Protein Length | 94 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641617208 |
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| Product | 50S ribosomal protein L25 |
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| Protein accession | YP_001744381 |
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| Protein GI | 170680132 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00267444 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.073363 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTACTA TCAACGCAGA AGTACGTAAA GAGCAGGGTA AGGGTGCGAG CCGCCGCCTG
CGTGCCGCTA ACAAGTTCCC GGCAATCATC TACGGTGGCA AAGAAGCGCC GCTGGCTGTC
GAACTGGATC ACGACAAAGT CATGAACATG CAAGTTAAAG CTGAATTCTA CAGCGAAGTT
CTGACCATCG TTGTTGACGG TAAAGAAATC AAAGTTAAAG CTCAGGACGT ACAGCGTCAC
CCGTACAAAC CGAAGCTGCT GCACATCGAC TTCGTTCGCG CTTAA
|
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| Protein sequence | MFTINAEVRK EQGKGASRRL RAANKFPAII YGGKEAPLAV ELDHDKVMNM QVKAEFYSEV
LTIVVDGKEI KVKAQDVQRH PYKPKLLHID FVRA
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