| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2326 |
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| Symbol | |
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| ID | 6146038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 2358022 |
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| End bp | 2359836 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641617200 |
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| Product | ABC transporter, periplasmic solute-binding protein |
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| Protein accession | YP_001744373 |
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| Protein GI | 170681154 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.00440714 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTGTGC GCATACTGCT GCTGTTTATC GCTCTGTTCA CCTTTGGTGC GCAGGCGCAG
GCTATCAAGG AAAGCTATGC CTTTGCCGTA CTGGGCGAAC CCCGGTACGC ATTTAATTTC
AACCATTTTG ATTATGTGAA CCCCGCCGCG CCAAAAGGTG GGCAAATAAC GTTGTCCGCC
CTCGGCACCT TCGATAATTT CAACCGCTAT GCACTACGCG GCAACCCGGG CGCACGCACC
GAGCAGCTGT ACGACACGCT ATTTACGACT TCCGATGACG AACCAGGCAG TTATTACCCG
CTGATTGCTG AAAGCGCACG CTATGCTGAC GATTATTCCT GGGTGGAGGT CGCTATTAAT
CCGCGCGCCC GTTTTCATGA TGGTTCGCCC ATTACTGCCC GCGATGTAGA GTTTACTTTT
CAAAAATTTA TGACCGAAGG CGTGCCGCAA TTTCGTCTGG TCTACAAAGG CACCACCGTC
AAAGCCATTG CGCCGTTAAC CGTGCGCATT GAGTTAGCTA AACCCGGCAA AGAAGATATG
CTGAGTCTGT TTTCGCTGCC GGTATTTCCA GAAAAGTACT GGAAAGATCA CAAACTTAGC
GACCCGCTCG CCACGCCTCC GCTTGCCAGT GGTCCGTACC GCATTACGTC CTGGAAAATG
GGGCAAAATA TTGTCTATTC CCGCGTAAAA GATTACTGGG CAGCAAACTT ACCGGTAAAC
CGTGGACGCT GGAATTTCGA CACCATTCGC TACGATTATT ACCTCGATGA TAATGTCGCC
TTTGAAGCGT TTAAAGCAGG TGCCTTTGAT TTGCGTATGG AAAACGACGC CAAAAACTGG
GCCACGCGCT ATACCGGTAA AAATTTCGAT AAAAAATACA TCATCAAAGA TGAGCAAAAG
AACGAATCAG CCCAGGATAC GCGCTGGCTG GCGTTTAATA TCCAACGTCC GGTATTCAGC
GATCGCCGGG TGCGGGAAGC GATCACTCTC GCCTTTGACT TTGAATGGAT GAACAAAGCG
TTGTTTTACA ATGCCTGGAG TCGCACGAAC AGTTATTTTC AGAATACCGA ATACGCGGCC
AGAAATTACC CCGACGCCGC GGAGCTGGTG CTTCTGGCAC CAATGAAAAA AGATCTACCG
CCAGAAGTCT TCACGCAAAT CTACCAGCCG CCGGTATCCA AAGGCGATGG CTACGATCGT
GACAACCTGT TAAAAGCCGA CAAACTTCTT AACGAAGCAG GCTGGGTGCT GAAGGGTCAG
CAACGCGTTA ATGCCACAAC GGGTCAGCCA CTCAGCTTTG AATTATTGCT TCCCTCAAGC
AGTAATAGTC AGTGGGTATT GCCGTTCCAG CACAGCCTGC AACGTCTGGG TATCAACATG
GATATTCGCA AGGTGGATAA CTCTCAAATC ACCAACCGCA TGCGCAGTCG CGACTATGAC
ATGATGCCGC GCGTATGGCG GGCGATGCCG TGGCCCAGTT CCGATTTACA GATTTCCTGG
TCATCGGAAT ATATCAATTC CACTTATAAT GCCCCCGGCG TGCAAAGCCC GGTTATCGAC
TCGCTGATCA ACCAAATTAT TGCCGCGCAG GGAAATAAAG AAAAATTACT GCCGTTGGGG
CGAGCACTGG ATCGCGTATT AACGTGGAAT TATTACATGC TGCCAATGTG GTATATGGCG
GAAGACCGTC TCGCCTGGTG GGATAAATTC TCCCACCCCG CTGTACGCCC TGTTTACAGC
CTGGGTATCG ATACCTGGTG GTATGACGTT AACAAAGCGA CGAAACTGCC GTCAGCCAGA
CAACAGGGAG AGTAG
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| Protein sequence | MIVRILLLFI ALFTFGAQAQ AIKESYAFAV LGEPRYAFNF NHFDYVNPAA PKGGQITLSA
LGTFDNFNRY ALRGNPGART EQLYDTLFTT SDDEPGSYYP LIAESARYAD DYSWVEVAIN
PRARFHDGSP ITARDVEFTF QKFMTEGVPQ FRLVYKGTTV KAIAPLTVRI ELAKPGKEDM
LSLFSLPVFP EKYWKDHKLS DPLATPPLAS GPYRITSWKM GQNIVYSRVK DYWAANLPVN
RGRWNFDTIR YDYYLDDNVA FEAFKAGAFD LRMENDAKNW ATRYTGKNFD KKYIIKDEQK
NESAQDTRWL AFNIQRPVFS DRRVREAITL AFDFEWMNKA LFYNAWSRTN SYFQNTEYAA
RNYPDAAELV LLAPMKKDLP PEVFTQIYQP PVSKGDGYDR DNLLKADKLL NEAGWVLKGQ
QRVNATTGQP LSFELLLPSS SNSQWVLPFQ HSLQRLGINM DIRKVDNSQI TNRMRSRDYD
MMPRVWRAMP WPSSDLQISW SSEYINSTYN APGVQSPVID SLINQIIAAQ GNKEKLLPLG
RALDRVLTWN YYMLPMWYMA EDRLAWWDKF SHPAVRPVYS LGIDTWWYDV NKATKLPSAR
QQGE
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