| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2276 |
|---|
| Symbol | |
|---|
| ID | 6147043 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 2299911 |
|---|
| End bp | 2301476 |
|---|
| Gene Length | 1566 bp |
|---|
| Protein Length | 521 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641617150 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001744323 |
|---|
| Protein GI | 170682431 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00656399 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.253648 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAAAT TATCCCCCCC TGAACTTGAC ATAACTAAAC TGCCTGACAG GTGCCAGGCA
TTACTTGATG AAATGCATGA AGAAACGGGA ATAAGCCGTG AAATACTGCT GTCTGTTATG
CTGACGGTCA AGGCTGTCTC GGTCCAGGAT ACGCATGAAG TTGAACTTTC TGGAGGGCAG
CGTACCAGTC TTCAGATATA TATGTGTCTT TCATCAGCAT CAGGCAGTGG AAAAACCTCT
GCCTGCGCAA AATTAATCGC CCCTGTTCAT GAAACAGAAG AAGAACTACA TCAGGCATAT
ATCGACGATA AAAAAAACTA TGATCGCATG ATGGAAATGT GGACAACAGA TAAAAAAATC
CTGGAGCGGA GATATAAAAA GGAAATGGAA AGATCCCCGG AAAATGCTGC TGCTGCACGA
GCAGCGCTTG AAAAGTGTAT AGCAAATAAA CCCGTACCTC CCGTACAACA GGTTCTCATC
GTGAATGACG CGACACCAGA AGGGATAGCT TTGAAACTCA GCCAGTCACC TTCTCTTCTG
TTGCTGTCTG ATGAAGGAGG AACTATTCTG GATAAGCGTT TCGAACGCAA ATCGGCGCTG
TACAACACAT TATGGAGTGG GCAACCAGTC ACCGTAGAAC GGGCATCCAG ACCCGGGTTC
CGGGTAAAGG ATTCCCGTCT CACTATGCTT ATACTGACTC AACCGGTAAT ATTTGATAAG
TTTTTTACTC TCACTGGCGA CCAGATCCGG GGCAATGGCT TTCTGGCCCG GGTGCTATTT
TGCGAACCCG GAGCAAATAA AATAATGACG ACAGAACCGC ATACTGCCAC TCCTGTTGTA
ACGCAGCAAT GTGCAACCTG TTTTCATGAG AAAAGTTTTG GCAGTCAGAT CAGAGACTCT
CTGAGAGCGT CCCGGGAAAG GCGTGCAAAA GGTGAGCAAC GCATCCGCAT GACATTATCA
CACGCAGCAT CCCACGATCT GGAAATCTTT CACGAAGAAA ATATGAGTGC TGTCAGGCAG
AACCCACGTA TGACCACTTT CGAAGACATT ATCGTCAGGA AAAGAGAACA GGCTGTTCGA
ATAGCCGCAC TTCTGGAGCT GGAGAACAAT CCACATGGTA CAGTAATAAC ACGAGAAAGT
ATCAATAGTG CTATTTATCT CGTTGATTTT TATTTTCAGC ATCTTATATC CAAACTGGAA
TCACTTCGGG AAATATCTCC TGCAGAAAAA CTGGATAAAT GGCTCAGAGA AAATATCATC
CGGGTAAAAG GATACGAATA TCAAAAAAGC CATATACTAC AATATGGTCC ATATGCTCTC
AGGAATAAAT GTGTTCTTGA TGAAGCACTT GATATACTTG CAGAACAGAA AAAAATCGTA
ATTGATTATT CAATCGGCCA AAAAATCATT TATATCGGTG ACGCGATTAC ACCTTGTGAA
TTAGCAAATG AGGCAAACAT CCCGATAATG GAGCGTGGAA TGTTTATAGT CTGTTGGGAC
CATAAGCTGA ATAAGTACAG AAATGAAGAA CAGACTAAAA TATGGAACAT AACTACAAAA
AATTAA
|
|---|
| Protein sequence | MTKLSPPELD ITKLPDRCQA LLDEMHEETG ISREILLSVM LTVKAVSVQD THEVELSGGQ
RTSLQIYMCL SSASGSGKTS ACAKLIAPVH ETEEELHQAY IDDKKNYDRM MEMWTTDKKI
LERRYKKEME RSPENAAAAR AALEKCIANK PVPPVQQVLI VNDATPEGIA LKLSQSPSLL
LLSDEGGTIL DKRFERKSAL YNTLWSGQPV TVERASRPGF RVKDSRLTML ILTQPVIFDK
FFTLTGDQIR GNGFLARVLF CEPGANKIMT TEPHTATPVV TQQCATCFHE KSFGSQIRDS
LRASRERRAK GEQRIRMTLS HAASHDLEIF HEENMSAVRQ NPRMTTFEDI IVRKREQAVR
IAALLELENN PHGTVITRES INSAIYLVDF YFQHLISKLE SLREISPAEK LDKWLRENII
RVKGYEYQKS HILQYGPYAL RNKCVLDEAL DILAEQKKIV IDYSIGQKII YIGDAITPCE
LANEANIPIM ERGMFIVCWD HKLNKYRNEE QTKIWNITTK N
|
|---|
| |