| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2175 |
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| Symbol | |
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| ID | 6146742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2182791 |
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| End bp | 2183480 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641617051 |
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| Product | putativi pili assembly chaperone |
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| Protein accession | YP_001744225 |
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| Protein GI | 170681882 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000435115 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.741204 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCGCTCT TGATTTTCGC CGTTTTATCG CTGCTGGTGG CGAGTGAATT GCAGGCAGGA
GTGGTGGTCG GCGGAACGCG ATTTATCTTT CCGGCAGACA GAGATTCGAT ATCTATTTTA
TTGACTAATA CCAGTCAGGA ATCCTGGCTT ATTAACAGTA AAATCAATCG CCCAACGCGT
TGGGCTGGGG GTGAAGCGTC GACAGTACCA GCACCATTAC TGGCCGCTCC GCCACTTATT
CTCCTGAAGC CCGGTACTAC AGGCACATTG CGCTTGCTGA GAACGGAAAG CGACATCTTG
CCCGTGGATC GCGAAACGCT ATTTGAGTTA AGCATTGCCA GCGTGCCATC CGGCAAAGTT
GAAAATCAGA GCGTAAAAGT GGCGATGCGC TCGGTATTTA AACTGTTCTG GCGACCCGAA
GGTTTGCCGG GCGACCCGCT GGAAGCTTAT CAACAATTAC GCTGGACACG GAATTCGCAG
GGTGTACAAC TCACTAACCC AACGCCTTAC TACATTAACC TGATTCAGGT GAGCGTAAAT
GGTAAAGCGT TAAGTAATGC GGGAGTTGTG CCACCTAAAA GCCAGCGTCA GACAAGCTGG
TGTCAGGCTA TAACACCGTG TCATGTCTCC TGGCGGACGA TAAATGATTA CGGCGGGTTG
AGTGCAAAGA AGGAGCAAAA TCTGCCCTGA
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| Protein sequence | MALLIFAVLS LLVASELQAG VVVGGTRFIF PADRDSISIL LTNTSQESWL INSKINRPTR
WAGGEASTVP APLLAAPPLI LLKPGTTGTL RLLRTESDIL PVDRETLFEL SIASVPSGKV
ENQSVKVAMR SVFKLFWRPE GLPGDPLEAY QQLRWTRNSQ GVQLTNPTPY YINLIQVSVN
GKALSNAGVV PPKSQRQTSW CQAITPCHVS WRTINDYGGL SAKKEQNLP
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