Gene EcSMS35_2173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2173 
Symbol 
ID6142636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2179848 
End bp2180957 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content50% 
IMG OID641617048 
ProductMOSC domain-containing protein 
Protein accessionYP_001744222 
Protein GI170682018 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0633] Ferredoxin
[COG3217] Uncharacterized Fe-S protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000104481 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.521589 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGACAT TAACCCGGCT TTTTATTCAT CCTGTTAAAT CGATGCGCGG CATTGGTCTT 
ACACATACCC TGGCAGATGT CAGTGGTCTG GCCTTCGATC GCATCTTTAT GATCACGGAA
CCTGACGGTA CGTTTATTAC CGCTCGCCAG TTTCCGCTAA TGGTACGGTT TACTCCTTCA
CCCGTGCATG ATGGCTTGCA TCTCACCGCA CCAGATGGCA GTAGTGCATA TGTTCGTTTT
GCTGATTTCG CCACACAAGA CGCACCAACC GAAGTTTGGG GCACACATTT TACCGCGCGA
ATTGCGCCAG ACGCGATCAA CAAATGGCTA AGTGGATTTT TCTCCCGCGA AGTGCAATTA
CGCTGGGTGG GGCCACAAAT GACCCGGCGC GTGAAACGCC ACAACACTGT ACCCCTGTCA
TTTGCTGATG GTTATCCTTA CCTTCTTGCT AACGAGGCCT CGTTACGTGA TCTCCAACAA
CGTTGTCCGG CCAGTGTAAA AATGGAGCAA TTCCGCCCCA ATCTGGTGGT TTCCGGTGCA
TCGGCCTGGG AAGAAGATAG CTGGAAAGTG ATTCGCATTG GTGATGTCGT GTTTGATGTG
GTTAAGCCTT GTAGCCGCTG TATTTTCACC ACCGTCAGCC CAGAAAAAGG GCAAAAACAT
CCGGCAGGCG AACCATTAAA AACGCTGCAA TCTTTCCGTA CTGCCCAGGA TAACGGCGAT
GTCGATTTTG GTCAGAATTT AATTGCCCGT AATAGCGGCG TGATTCGCGT TGGCGATGAG
GTGGAAATTC TGGCAACGGC TCCAGCTAAA ATTTACGGCG CAGGTGCCGC CGATGATACT
GCCAACATCA CGCAACAACC GGACGCAAAC GTAGATATTG ACTGGCAGGG ACAGGCATTT
CGTGGAAATA ACCAACAGGT GCTGCTGGAG CAATTAGAAA ATCAGGGAAT TCGTATCCCT
TATTCTTGCC GCGCGGGCAT TTGTGGAAGT TGCCGTGTTC AGCTTTTAGA AGGCGAAGTC
ACGCCGCTGA AAAAATCAGC AATGGGTGAT GATGGCACTA TTCTTTGCTG TAGTTGTGTA
CCGAAGACTG CACTTAAGCT GACGCGTTAA
 
Protein sequence
MATLTRLFIH PVKSMRGIGL THTLADVSGL AFDRIFMITE PDGTFITARQ FPLMVRFTPS 
PVHDGLHLTA PDGSSAYVRF ADFATQDAPT EVWGTHFTAR IAPDAINKWL SGFFSREVQL
RWVGPQMTRR VKRHNTVPLS FADGYPYLLA NEASLRDLQQ RCPASVKMEQ FRPNLVVSGA
SAWEEDSWKV IRIGDVVFDV VKPCSRCIFT TVSPEKGQKH PAGEPLKTLQ SFRTAQDNGD
VDFGQNLIAR NSGVIRVGDE VEILATAPAK IYGAGAADDT ANITQQPDAN VDIDWQGQAF
RGNNQQVLLE QLENQGIRIP YSCRAGICGS CRVQLLEGEV TPLKKSAMGD DGTILCCSCV
PKTALKLTR