Gene EcSMS35_1976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1976 
Symbol 
ID6147123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1997802 
End bp1998128 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content52% 
IMG OID641616852 
Producthypothetical protein 
Protein accessionYP_001744028 
Protein GI170681171 
COG category 
COG ID 
TIGRFAM ID[TIGR03304] outer membrane insertion C-terminal signal 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0242164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGTCGA AATCAGTCGA TACCCGCAGT ATATATCGTG AACTGGGCGC AACGCTGAGT 
TACAACATGC GTCTGGGTAA CGGTATGGAA GTTGAGCCGT GGCTGAAGGC GGCTGTGCGC
AAAGAATTTG TCGATGATAA CCGGGTGAAA GTGAATAATG ACGGTAATTT TGTCAATGAT
TTGTCGGGCA GACGTGGAAT ATATCAGGCA GGTATTAAAG CCTCATTCAG CAGTTCGTTA
AGCGGGCATC TCGGGGTGGG GTATAGCCAT GGTGCCGGTG TGGAATCCCC GTGGAACGCG
GTGGCTGGTG CGAACTGGTC GTTCTGA
 
Protein sequence
MGSKSVDTRS IYRELGATLS YNMRLGNGME VEPWLKAAVR KEFVDDNRVK VNNDGNFVND 
LSGRRGIYQA GIKASFSSSL SGHLGVGYSH GAGVESPWNA VAGANWSF