| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1785 |
|---|
| Symbol | abgB |
|---|
| ID | 6144073 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 1803199 |
|---|
| End bp | 1804644 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641616661 |
|---|
| Product | aminobenzoyl-glutamate utilization protein B |
|---|
| Protein accession | YP_001743839 |
|---|
| Protein GI | 170682636 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
|---|
| TIGRFAM ID | [TIGR01891] amidohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGAAA TCTATCGTTT TATCGACGAT GCGATTGAAG CCGATCGCCA ACGTTATACC
GATATTGCCG ATCAAATCTG GGATCATCCA GAAACACGTT TTGAAGAGTT CTGGTCAGCG
GAGCATCTGG CTTCGGCGCT GGAGTCTGCA GGCTTCACCG TTACCCGCAA CGTAGGCAAT
ATCCCAAATG CCTTTATTGC TTCGTTTGGT CAAGGCAAAC CGGTTATCGC CCTGCTGGGG
GAATATGACG CCCTGGCAGG TTTAAGTCAG CAAGCAAGTT GCGCGCAACC TACATCCGCG
ACGCCCGGTG AAAATGGTCA CGGTTGCGGA CACAATTTGC TGGGAACCGC CGCCTTTGCC
GCTGCAATAG CCGTCAAGAA ATGGCTGGAA CAATATGGGC AAGGCGGCAC GGTGCGCTTT
TATGGTTGTC CTGGCGAAGA AGGCGGCTCG GGTAAAACGT TCATGGTCCG CGAGGGGGTA
TTTGATGATG TGGATGCGGC ACTCACCTGG CACCCGGAAG CCTTTGCCGG TATGTTCAAT
ACCCGCACGC TGGCAAACAT TCAGGCATCA TGGCGCTTTA AAGGGATCGC AGCACATGCC
GCGAATTCCC CTCATTTGGG ACGCAGCGCC CTTGATGCCG TAACGTTGAT GACCACTGGC
ACCAACTTCC TCAACGAACA TATTATTGAA AAAGCGCGCG TACACTATGC CATCACAGAT
AGCGGCGGGA TCTCGCCCAA CGTGGTCCAG GCGCAGGCAG AAGTGCTTTA TCTTATCCGC
GCCCCCGAAA TGACCGATGT GCAGCATATT TATGATCGGG TCGCCAAAAT CGCCGAAGGT
GCGGCATTGA TGACCGAAAC CACGGTTGAA TGCCGCTTCG ACAAAGCCTG TTCCAGTTAT
CTCCCGAATC GCACCTTAGA AAATGCCATG TACCGAGCCC TATCCCATTT TGGTACCCCG
GAATGGAACT GCGAAGAACT GGCTTTTGCG AAACAAATTC AGGCTACGCT CACCCCCAAC
GATCGGCAAA ACAGTCTGAA TAATATCGCT GCAACCGGTG GCGAAAACGG CAAGGCTTTT
GCACTACGTC ATCGTGAAAC GGTACTGGCG AATGAAGTCG CTCCATATGC CGCCACCGAT
AACGTGCTTG CGGCATCGAC TGATGTCGGC GACGTCAGTT GGAAACTGCC TGTTGCCCAG
TGTTTCAGCC CCTGCTTTGC CGTCGGTACC CCGCTACATA CGTGGCAACT GGTTAGCCAG
GGGCGAACAT CTATTGCTCA TAAAGGAATG CTGCTGGCGG CGAAAACTAT GGCAGCAACC
ACACTTAATC TCTTCATTGA TTCAGGGCTA TTGCAAGAAT GCCAACAAGA GCATCAGCAA
GTTACGGACA CGCAACCGTA TCACTGCCCT ATCCCGAAAA ACGTGACACC GTCACCTTTA
AAATAA
|
|---|
| Protein sequence | MQEIYRFIDD AIEADRQRYT DIADQIWDHP ETRFEEFWSA EHLASALESA GFTVTRNVGN
IPNAFIASFG QGKPVIALLG EYDALAGLSQ QASCAQPTSA TPGENGHGCG HNLLGTAAFA
AAIAVKKWLE QYGQGGTVRF YGCPGEEGGS GKTFMVREGV FDDVDAALTW HPEAFAGMFN
TRTLANIQAS WRFKGIAAHA ANSPHLGRSA LDAVTLMTTG TNFLNEHIIE KARVHYAITD
SGGISPNVVQ AQAEVLYLIR APEMTDVQHI YDRVAKIAEG AALMTETTVE CRFDKACSSY
LPNRTLENAM YRALSHFGTP EWNCEELAFA KQIQATLTPN DRQNSLNNIA ATGGENGKAF
ALRHRETVLA NEVAPYAATD NVLAASTDVG DVSWKLPVAQ CFSPCFAVGT PLHTWQLVSQ
GRTSIAHKGM LLAAKTMAAT TLNLFIDSGL LQECQQEHQQ VTDTQPYHCP IPKNVTPSPL
K
|
|---|
| |