| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1781 |
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| Symbol | |
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| ID | 6147213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1798598 |
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| End bp | 1799890 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641616657 |
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| Product | sensory box-containing diguanylate cyclase |
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| Protein accession | YP_001743835 |
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| Protein GI | 170681443 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.900668 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTGGC TTTTTTGCGA TCGGATAGCA ACAAAAATTG ATAAAAATAA CGGGATCTCA
ATGATTACGC ACAACTTCAA TACCCTGGAC TTACTCACCA GTCCTGTCTG GATCGTTTCG
CCCTTTGAGG AACAGTTAAT TTATGCCAAC AGCGCGGCGC GACTGTTGAT GCAAGACCTC
ACGTTTAGTC AGCTACGAAC CGGTCCCTAT TCCGTCTCCT CACAAAAAGA ACTGCCGAAA
TACCTCTCCG ATCTGCAAAA CCAACACGAT ATTATCGAAA TCCTCACCGT TCAACGTAAA
GAAGAGGAAA CAGCATTAAG CTGTCGGCTT GTTTTGCGAG AGCTGACAGA AGCAGAACCG
GTGATTATTT TCGAAGGTAT CGAAGCGCCG GCAACGCTGG GTTTAAAAGC CAGTCGCTCG
GCAAATTATC AGCGCAAAAA ACAAGGTTTT TATGCGCGCT TTTTTCTGAC TAACTCTGCA
CCAATGTTGT TGATTGACCC CTCACGAGAT GGCCAAATCG TTGATGCTAA CCTCGCCGCG
CTCAATTTCT ATGGTTATAA CCATGAAACG ATGTGCCAGA AACATACCTG GGAAATAAAT
ATGCTCGGGC GACGCGTCAT GCCTATCATG CATGAAATTT CGCATTTACC CGGTGGCCAT
AAGCCTTTGA ATTTTGTTCA TAAATTGGCG GATGGTTCGA CTCGTCATGT GCAGACCTAT
GCCGGTCCGA TTGAAATTTA TGGCGACAAG CTCATGTTAT GTATTGTGCA TGATATTACT
GAGCAAAAAC GGCTGGAGGA GCAGCTGGAA CATGCTGCCC ACCATGACGC GATGACCGGA
TTACTGAATC GGCGACAGTT TTATCACATT ACCGAGCCAG GCCAAATGCA GCACCTCGCC
ATCGCTCAGG ATTACAGCTT GTTGCTCATC GACACCGATC GTTTTAAACA CATTAACGAT
CTCTATGGGC ATTCTAAAGG TGATGAGGTG TTATGCGCCC TCGCCCGCAC CCTCGAAAGT
TGCGCTCGCA AAGGCGATTT GGTGTTTCGT TGGGGAGGCG AAGAGTTTGT CTTATTGCTA
CCAAGAACCC CACTGGATAC CGCGCTTTCG CTGGCTGAAA CTATCCGCGT AAGCGTGGCA
AAAGTGAGTA TTTCGGGCTT ACCACGCTTT ACCGTCAGCA TTGGTGTGGC GCATCACGAA
GGAAATGAAA GCATCGATGA GCTGTTTAAA CGCGTTGATG ATGCTTTGTA TCGGGCGAAA
AATGATGGAC GCAACCGCGT GCTGGCGGCA TAA
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| Protein sequence | MTWLFCDRIA TKIDKNNGIS MITHNFNTLD LLTSPVWIVS PFEEQLIYAN SAARLLMQDL
TFSQLRTGPY SVSSQKELPK YLSDLQNQHD IIEILTVQRK EEETALSCRL VLRELTEAEP
VIIFEGIEAP ATLGLKASRS ANYQRKKQGF YARFFLTNSA PMLLIDPSRD GQIVDANLAA
LNFYGYNHET MCQKHTWEIN MLGRRVMPIM HEISHLPGGH KPLNFVHKLA DGSTRHVQTY
AGPIEIYGDK LMLCIVHDIT EQKRLEEQLE HAAHHDAMTG LLNRRQFYHI TEPGQMQHLA
IAQDYSLLLI DTDRFKHIND LYGHSKGDEV LCALARTLES CARKGDLVFR WGGEEFVLLL
PRTPLDTALS LAETIRVSVA KVSISGLPRF TVSIGVAHHE GNESIDELFK RVDDALYRAK
NDGRNRVLAA
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