| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1665 |
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| Symbol | |
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| ID | 6146415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1658540 |
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| End bp | 1659250 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641616541 |
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| Product | periplasmic pilus chaperone family protein |
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| Protein accession | YP_001743719 |
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| Protein GI | 170683705 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.656199 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACTA CGCGTATCCC CTACTCTATT TCCTTTATGG CGACAGTGTT ACTTTTATTG
CTCTTTGCTT GCCATAGCAC CATTGCCAAC GCAGCTGTCG CACTTGGTGC GACGCGGGTA
ATTTATCCGG CAAACCAGAA ACAGGTTTTA TTGCCTGTCA CGAATAATGA TCCTGCCAGT
GTCTATCTCA TTCAGTCATG GATAGAAAAT GCAGGTGACC AAAAAGACAC CCAGTTTGTC
ATTACCCCAC CGCTTTTTTC CATGCAAGGT AAAAAAGAGA ATACGCTTCG GATAATCAAC
GCCACTAATC ATCAGTTACC AGGCGACCGT GAAAGCCTGT TTTGGGTTAA TGTTAAAGCT
ATTCCTGCTA TGGAAAAAGA CCAGAAGAAT GAGAATACAT TACAGCTGGC AATTATTAGC
CGCATAAAAA TGTTTTATCG CCCGACGAAC CTGGCAATGG CACCTGAAGA AGCGCCAGCA
ATGCTTCGGT TTCGTCGCAG CGGTAGCAAA CTCACTCTTA TTAATCCAAC GCCCTACTTC
ATTACCGTAA CAAATATGAA AGCAGGAAAT AGCAATCTCC CAAACACCAT GGTGCCGCCA
AAAGGTGAAG TATCGGTGGA TATCCCGCAT GCTGCAACCG GGGATATCAG TTTTCAGACG
ATCAATGATT ACGGTGCATT AACTCCGCGT ATTAAGGCAA CCATGCAGTA A
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| Protein sequence | MQTTRIPYSI SFMATVLLLL LFACHSTIAN AAVALGATRV IYPANQKQVL LPVTNNDPAS
VYLIQSWIEN AGDQKDTQFV ITPPLFSMQG KKENTLRIIN ATNHQLPGDR ESLFWVNVKA
IPAMEKDQKN ENTLQLAIIS RIKMFYRPTN LAMAPEEAPA MLRFRRSGSK LTLINPTPYF
ITVTNMKAGN SNLPNTMVPP KGEVSVDIPH AATGDISFQT INDYGALTPR IKATMQ
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