| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1619 |
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| Symbol | rspA |
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| ID | 6142908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1608687 |
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| End bp | 1609901 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641616495 |
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| Product | starvation-sensing protein RspA |
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| Protein accession | YP_001743673 |
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| Protein GI | 170684261 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000210785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCG TAAAGGCTGA AGTTTTTGTT ACCTGTCCGG GGCGTAATTT CGTCACATTA
AAAATCACCA CTGAGGACGG TATTACGGGC CTTGGGGATG CCACCCTAAA TGGACGTGAG
CTTTCCGTGG CCTCTTATTT GCAGGATCAC CTTTGTCCGC AGCTTATTGG TCGCGATGCA
CACCGTATCG AAGATATCTG GCAGTTTTTC TATAAAGGTG CTTACTGGCG TCGCGGTCCG
GTTACGATGT CGGCCATTTC AGCGGTTGAT ATGGCGCTGT GGGATATTAA AGCCAAAGCT
GCCGACATGC CGCTTTACCA GTTACTCGGC GGCGCGTCTC GTGAAGGGGT GATGGTTTAT
TGCCATACCA CCGGTCACAG TATTGATGAA GCTCTGGATG ATTATGCCCG TCATCAGGAG
CTGGGATTCA AAGCCATCCG CGTGCAGTGC GGAATCCCTG GTATGAAAAC CACCTATGGC
ATGTCGAAAG GTAAAGGTCT GGCTTATGAA CCCGCAACCA AAGGACAGTG GCCGGAAGAG
CAGCTGTGGT CGACGGAGAA ATACCTCGAT TTCATGCCGA AATTGTTTGA CGCGGTACGT
AACAAGTTTG GTTTTAATGA ACATTTGCTT CATGACATGC ACCATCGCTT AACGCCTATT
GAAGCGGCGC GCTTTGGTAA AAGCATTGAA GATTATCGCA TGTTCTGGAT GGAAGACCCG
ACGCCTGCGG AAAACCAGGA GTGTTTCCGC CTGATTCGCC AACACACCGT CACGCCAATT
GCAGTGGGTG AAGTCTTCAA CAGCATCTGG GACTGCAAAC AGCTGATTGA AGAACAACTC
ATCGACTATA TCCGCACCAC GCTGACTCAC GCGGGGGGGA TTACCGGTAT GCGCCGGATT
GCCGATTTTG CTTCGCTGTA TCAGGTACGT ACTGGCTCAC ACGGTCCTTC CGATTTGTCG
CCAGTCTGCA TGGCTGCGGC GCTGCACTTT GATCTGTGGG TCCCCAATTT CGGTGTCCAG
GAATACATGG GTTATTCCGA ACAAATGCTT GAAGTCTTCC CGCACAACTG GACTTTCGAT
AACGGCTATA TGCATCCGGG AGACAAACCG GGTCTTGGCA TCGAATTCGA TGAAAAGCTG
GCGGCGAAAT ATCCCTATGA ACCTGCTTAT CTGCCAGTCG CACGTCTGGA AGATGGCACG
CTGTGGAACT GGTAA
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| Protein sequence | MKIVKAEVFV TCPGRNFVTL KITTEDGITG LGDATLNGRE LSVASYLQDH LCPQLIGRDA
HRIEDIWQFF YKGAYWRRGP VTMSAISAVD MALWDIKAKA ADMPLYQLLG GASREGVMVY
CHTTGHSIDE ALDDYARHQE LGFKAIRVQC GIPGMKTTYG MSKGKGLAYE PATKGQWPEE
QLWSTEKYLD FMPKLFDAVR NKFGFNEHLL HDMHHRLTPI EAARFGKSIE DYRMFWMEDP
TPAENQECFR LIRQHTVTPI AVGEVFNSIW DCKQLIEEQL IDYIRTTLTH AGGITGMRRI
ADFASLYQVR TGSHGPSDLS PVCMAAALHF DLWVPNFGVQ EYMGYSEQML EVFPHNWTFD
NGYMHPGDKP GLGIEFDEKL AAKYPYEPAY LPVARLEDGT LWNW
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