| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1329 |
|---|
| Symbol | znuA |
|---|
| ID | 6146875 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 1317396 |
|---|
| End bp | 1318454 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641616207 |
|---|
| Product | high-affinity zinc transporter periplasmic component |
|---|
| Protein accession | YP_001743387 |
|---|
| Protein GI | 170681737 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4531] ABC-type Zn2+ transport system, periplasmic component/surface adhesin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00390701 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCCAAAA GAAACCGAGA CATTTTCCAG GGAAACCAGA CTTGTCATGT TAATTTTAGT
CTTGCAGTAG TCATGAAATG TTATAATATC ACACTTCTCA TATTCATTAC GATGATTGGT
CGCATTATGT TACATAAAAA AACGCTTCTT TTCGCAGCAT TATCCGCCGC TCTCTGGGGA
GGTGCAACAC AGGCCGCAGA TGCCGCCGTT GTCGCTTCGC TTAAACCCGT TGGGTTCATC
GCTTCTGCCA TTGCTGATGG GGTAACAGAA ACGGAGGTTT TACTACCTGA CGGCGCTTCA
GAGCATGATT ATTCACTGCG TCCATCAGAT GTAAAACGCT TACAGAACGC GGACTTAGTC
GTTTGGGTTG GCCCGGAGAT GGAAGCGTTC ATGCAAAAAC CGGTAAGTAA ATTACCTGAA
GCCAAACAGG TAACGATTGC GCAGCTAGAG AATGTGAAAC CGCTGCTGAT GAAAAGTATT
CACGGCGATG ATGATGATCA CGACCACGCG GAAAAAAGTG ACGAAGATCA CCATCACGGC
GATTTCAACA TGCATCTTTG GCTTTCCCCA GAGATAGCGC GGGCTACAGC GGTTGCAATC
CATGAAAAAT TAGTGGAACT TATGCCGCAA AGTCGAGCCA AACTTGACGC CAACCTGAAG
GATTTTGAGG CACAATTAGC CTCAACCGAA ACGCAGGTTG GTCACGAGCT CGCGCCGCTC
AAGGGGAAAG GTTATTTCGT TTTTCACGAT GCTTACGGCT ACTTCGAAAA ACAGTTCGGA
CTAACACCGC TTGGTCATTT TACCGTTAAC CCTGAGATTC AACCTGGCGC GCAGCGTTTA
CATGAAATAA GAACACAGTT GGTTGAGCAA AAAGCAACCT GCGTTTTTGC TGAGCCACAG
TTCAGGCCAG CGGTCGTTGA GAGCGTCGCT CGAGGGACAT CCGTTCGTAT GGGAACGTTG
GATCCCCTGG GGACGAATAT CAAACTGGGT AAAACAAGCT ATTCAGAATT CCTGAATCAA
TTAGCCAACC AGTATGCGAG CTGCCTGAAA GGAGATTAA
|
|---|
| Protein sequence | MAKRNRDIFQ GNQTCHVNFS LAVVMKCYNI TLLIFITMIG RIMLHKKTLL FAALSAALWG
GATQAADAAV VASLKPVGFI ASAIADGVTE TEVLLPDGAS EHDYSLRPSD VKRLQNADLV
VWVGPEMEAF MQKPVSKLPE AKQVTIAQLE NVKPLLMKSI HGDDDDHDHA EKSDEDHHHG
DFNMHLWLSP EIARATAVAI HEKLVELMPQ SRAKLDANLK DFEAQLASTE TQVGHELAPL
KGKGYFVFHD AYGYFEKQFG LTPLGHFTVN PEIQPGAQRL HEIRTQLVEQ KATCVFAEPQ
FRPAVVESVA RGTSVRMGTL DPLGTNIKLG KTSYSEFLNQ LANQYASCLK GD
|
|---|
| |