| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1209 |
|---|
| Symbol | |
|---|
| ID | 6147283 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 1214150 |
|---|
| End bp | 1215190 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641616087 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001743270 |
|---|
| Protein GI | 170682042 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.852584 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.278976 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTACAT CGACAGTAAT TCCTGAAGAC ATCAAAACGC TAAAATCCGA CGTTAGCAAA
TTAAAAAACG ATCAAGGAAG CTACGCAACA AAATCATATG TAGACAATAA AACAACATGG
AATAGTTATT GCAATGTAAT CTATGATCAA AAGACATTGC CGACCACTGG AACTATATTT
AGCGGTAAGA TTCACTTGTC AAATAAGACA GGAGAAACCG AAAACGCTTA TAGTGAGATG
TACACTAGAA AAAATATTGA CGGTACAAAA GATACAATGA CAAGGATTGT CACACACAAT
GGAACAAAAG GTATCTTTTG GGATTTTAGC GATCTTTACG GTGGAACATT AATTTTTCCA
GGCAGTGATG GTTACCTTAA GATGGGGAAC TGTCTCATGT CGTATGGTGT GCGGGGAAGT
AACGCGCTTA TTAAGTTTGA CTGCACAGAC ACATTACAAA TCAAATATGC CAATCATGGG
TCAACCATGA CAATCAACAC ACAGGGAACC GCTCATTCTG GCGCTACTAC TAGTTTGTGG
GGTAACTCTA CCCGTCCGGT TGTATATGAA GTTGGTGCTG ATGGTGGCGC TTATATGTTC
TATGCGCAGA AAAATACCGA TAACACCTAT ATGTTAAGCG TTAATGGTGC ATGTCATGCC
ACCGCATTTA ACCAGCATTC CGACCGGGAT CTGAAAGACA ACATTCAGGT GATCGATAAT
GCAACCGACC GCATCCGTAA AATGAACGGC TATACATACA CGCTTAAAGA AAACGGTATG
CCCTATGCTG GTGTCATTGC ACAGGAAGCT CTGGAAGCAA TCCCAGAAGT TGTAGGTTCC
GCAATGAAAT ATCAGGACGG TGCAAGCGGA TCGGAAGGTG AAGAAGGTGA ACGTTATTAC
ACAGTAGATT ATTCTGGTGT TACTGGCTTG CTTGTTCAGG TAGCCAGAGA GTCAGACGAC
AGAATAACAG CACTGGAAGA AGAAAACGCA GAATTAAGAC AAAGATTATC TGCAATTGAG
GCGGCGCTTG CGTCTAAATA A
|
|---|
| Protein sequence | MATSTVIPED IKTLKSDVSK LKNDQGSYAT KSYVDNKTTW NSYCNVIYDQ KTLPTTGTIF
SGKIHLSNKT GETENAYSEM YTRKNIDGTK DTMTRIVTHN GTKGIFWDFS DLYGGTLIFP
GSDGYLKMGN CLMSYGVRGS NALIKFDCTD TLQIKYANHG STMTINTQGT AHSGATTSLW
GNSTRPVVYE VGADGGAYMF YAQKNTDNTY MLSVNGACHA TAFNQHSDRD LKDNIQVIDN
ATDRIRKMNG YTYTLKENGM PYAGVIAQEA LEAIPEVVGS AMKYQDGASG SEGEEGERYY
TVDYSGVTGL LVQVARESDD RITALEEENA ELRQRLSAIE AALASK
|
|---|
| |