Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1195 |
Symbol | |
ID | 6147419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 1198883 |
End bp | 1199587 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641616073 |
Product | hypothetical protein |
Protein accession | YP_001743256 |
Protein GI | 170682737 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0000320385 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCTCTA ATTTTGAGCG TTCGCAACTG ACGAAAATTA TGATTTCGTC TGCACCGGTA ACAGCAGAAA CCCTGGATTC TGCCAGCTAT CTTGGCCTGA GCTGTACAAT CAAAGAGGTG CAGTTTACCG CAGGACAAAA GCAGGATATT GATGTCACCA CGCTGTGTTC TGTTGAGCAG GAAAATATTA ACGGCCTTGG TGCCGCGTCA GAGATTTCCA TGTCAGGCAA CTTTTACCTC AATGCTGCCC AGAACGCGTT GCGCAGTGCC TATGACAATG ACACCACGTA TGGCTTTAAA GTTATTTTTC CGTCAGGCAA CGGATTTACC TTTATGGCAG AGGTGCGTCA GCATACCTGG TCTGCAGGAA CTAATGGTGT TGTGGCTGCA ACGTTTTCCC TGCGCCTGAA AGGTAAACCT GTGCTGACGA CAGAGCCGCT GAAAGTGAAG GTCGATTTAA ACAGCACGCT GCAGGTTTCT GCCGGAGCGA AACTCGAAAT GGTGGTTGAG GCTGCCGGTG GTGTGCCGCC TTATTCTTAT GTCTGGAAGA AAGGTAGTTC TCCTGTTTCC GGACAGACGG CGGCAACATT CAGTAAGGCA TCAGCAGCAT CAGGTGATGC CGGTGCGTAT ACCTGCGAGA TTTCTGATTC AGCAAGCCCT GTTAACAAGG TGACCTCCAC TTCCTGCACT GTTACCGTCA GTTAA
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Protein sequence | MSSNFERSQL TKIMISSAPV TAETLDSASY LGLSCTIKEV QFTAGQKQDI DVTTLCSVEQ ENINGLGAAS EISMSGNFYL NAAQNALRSA YDNDTTYGFK VIFPSGNGFT FMAEVRQHTW SAGTNGVVAA TFSLRLKGKP VLTTEPLKVK VDLNSTLQVS AGAKLEMVVE AAGGVPPYSY VWKKGSSPVS GQTAATFSKA SAASGDAGAY TCEISDSASP VNKVTSTSCT VTVS
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