Gene EcSMS35_1195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1195 
Symbol 
ID6147419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1198883 
End bp1199587 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content50% 
IMG OID641616073 
Producthypothetical protein 
Protein accessionYP_001743256 
Protein GI170682737 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0000320385 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCTCTA ATTTTGAGCG TTCGCAACTG ACGAAAATTA TGATTTCGTC TGCACCGGTA 
ACAGCAGAAA CCCTGGATTC TGCCAGCTAT CTTGGCCTGA GCTGTACAAT CAAAGAGGTG
CAGTTTACCG CAGGACAAAA GCAGGATATT GATGTCACCA CGCTGTGTTC TGTTGAGCAG
GAAAATATTA ACGGCCTTGG TGCCGCGTCA GAGATTTCCA TGTCAGGCAA CTTTTACCTC
AATGCTGCCC AGAACGCGTT GCGCAGTGCC TATGACAATG ACACCACGTA TGGCTTTAAA
GTTATTTTTC CGTCAGGCAA CGGATTTACC TTTATGGCAG AGGTGCGTCA GCATACCTGG
TCTGCAGGAA CTAATGGTGT TGTGGCTGCA ACGTTTTCCC TGCGCCTGAA AGGTAAACCT
GTGCTGACGA CAGAGCCGCT GAAAGTGAAG GTCGATTTAA ACAGCACGCT GCAGGTTTCT
GCCGGAGCGA AACTCGAAAT GGTGGTTGAG GCTGCCGGTG GTGTGCCGCC TTATTCTTAT
GTCTGGAAGA AAGGTAGTTC TCCTGTTTCC GGACAGACGG CGGCAACATT CAGTAAGGCA
TCAGCAGCAT CAGGTGATGC CGGTGCGTAT ACCTGCGAGA TTTCTGATTC AGCAAGCCCT
GTTAACAAGG TGACCTCCAC TTCCTGCACT GTTACCGTCA GTTAA
 
Protein sequence
MSSNFERSQL TKIMISSAPV TAETLDSASY LGLSCTIKEV QFTAGQKQDI DVTTLCSVEQ 
ENINGLGAAS EISMSGNFYL NAAQNALRSA YDNDTTYGFK VIFPSGNGFT FMAEVRQHTW
SAGTNGVVAA TFSLRLKGKP VLTTEPLKVK VDLNSTLQVS AGAKLEMVVE AAGGVPPYSY
VWKKGSSPVS GQTAATFSKA SAASGDAGAY TCEISDSASP VNKVTSTSCT VTVS