Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1083 |
Symbol | |
ID | 6147007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 1098207 |
End bp | 1098965 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641615969 |
Product | hypothetical protein |
Protein accession | YP_001743161 |
Protein GI | 170682124 |
COG category | [S] Function unknown |
COG ID | [COG5426] Uncharacterized membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.842688 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAACA CCAAAAAATC ACTAAAGGTG CTCTTTATTG GAGAATCCTG GCATATTCAT ATGATTCATT CAAAAGGATA TGACAGTTTT ACCTCAAGTA AATATGAAGA AGGTGCGACC TGGTTACTCC AATGTCTGAA AAATAGTCAG GTAGATGTCA CCTATATGCC GGCACATACG GTACAAATTG CCTTCCCTGA AGATGTGGCA CAGTTAGAAC AATATGATGC CATCGTTATT AGTGATATTG GTAGTAATAC TTTCCTGCTA CAAAATGATA CTTTTTATCA GCTTCGCATA AAACCAAACG CTCTCGAACT GATTAAAGAA TATGTGAATA ACGGTGGTGG GTTATTGATG ATTGGCGGCT ATCTCTCATT CATGGGAATT GAAGCAAAAG CCAATTATAA AAATACAGTT CTGGCTGATG TGCTCCCGGT TACGATGTTA GATGGTGACG ATCGTGTCGA AAAACCAGAG GGTGTTATTG CACAGCCATC ACAACCTGAC CATCCGGTTA TTAAAGGGTT CTCTGAATAT CCTTTTTTCC TAGGTTATAA CCGGGCGATC GCTAAAGAAA ATGCTGAGGT GGTATTAACA ATAAACAACG ATCCATTACT GGTCTTTGGT AACTATCACA ACGGGAAAAT AGCCTGCTTT ATGAGTGACT GTTCACCGCA CTGGGGTACA CAGCAGTTTA TGTCCTGGCC GTTCTATACC GCGTTGTGGG TAAATATACT GACTCATATT GCAAGATAA
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Protein sequence | MNNTKKSLKV LFIGESWHIH MIHSKGYDSF TSSKYEEGAT WLLQCLKNSQ VDVTYMPAHT VQIAFPEDVA QLEQYDAIVI SDIGSNTFLL QNDTFYQLRI KPNALELIKE YVNNGGGLLM IGGYLSFMGI EAKANYKNTV LADVLPVTML DGDDRVEKPE GVIAQPSQPD HPVIKGFSEY PFFLGYNRAI AKENAEVVLT INNDPLLVFG NYHNGKIACF MSDCSPHWGT QQFMSWPFYT ALWVNILTHI AR
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