Gene EcSMS35_1082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1082 
Symbol 
ID6145864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1097185 
End bp1098150 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content47% 
IMG OID641615968 
Producthypothetical protein 
Protein accessionYP_001743160 
Protein GI170682798 
COG category[S] Function unknown 
COG ID[COG3238] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA ATAAGTACTC AACTCCCTTA TGGATGCTTG CCACGATTCT TGCGGGTATG 
CTCTCCCCTA TGCAATCAGC GGTGAATGGT CAATTAGGTC ACTGGTTACA GGACGGTAAT
GCATGCGCAG TTATCTCCTT TGCCAGTGGT TTAGTCGTGA TGTTTTTTAT TATTATGGCG
CGAAAAGAAA CCCGGCAACA ATTTGCGGCA ATTCCTTCTC TGATTAAAAA CCGAAAAGTT
CCTCTCTGGA ACTGGTTTGC CGGTCTCTGT GGAGCGATGG TGGTATTTTC TGAAGGCGCA
TCAGCCAGCG CACTCGGGGT CGCAACGTTT CAGACCGCAC TGATCTCCGC GCTATTGCTG
TCTGGTTTAC TTTGCGATCG CTTTGGTATC GGTGTCGACG AGAAAAAATA CTTTACCCCT
TATCGCATCA TCGGTGCATT ATTTGCGGTT ATTGCTACGA TTTTTGTTGT GTCACCGCAG
TGGCATTCTA CCTCTTTCAT TTTACTTGCC ATTCTTCCGT TCTTAGCTGG TTTGCTTGCA
GGATGGCAGC CCGCTGGAAA TGCAAAAGTA GCTGAAGCTA CGGGATCCAT GCTGGTTTCA
ATCACCTGGA ATTTCATCGT TGGATTTTGT GTTTTAGGCA CAGCGCTAGC TATTCGTGTC
GCATTAGGGC ACGTCACTGT TCAATTACCA GATGTCTGGT GGATGTATCT TGGCGGCCCA
CTTGGACTAA TGTCTATCGG TTTAATGGCC ATTTTGGTCA GAGGTCTTGG GTTACTGATG
CTGGGGGTTG CTTCAACGGC GGGCCAGTTA CTGGGATCAG TATTGATTGA CGTATTAATT
CCATCGCTGG GCAATACCGT TTATCTGGTC ACGATCATCG GAACACTGTT TGCACTGGTC
GGTGCAATTG TTACCACTAT TCCGGAATAC AGAGCCTCGA AAACAATGAA GAAAATGGAG
GTATAA
 
Protein sequence
MKKNKYSTPL WMLATILAGM LSPMQSAVNG QLGHWLQDGN ACAVISFASG LVVMFFIIMA 
RKETRQQFAA IPSLIKNRKV PLWNWFAGLC GAMVVFSEGA SASALGVATF QTALISALLL
SGLLCDRFGI GVDEKKYFTP YRIIGALFAV IATIFVVSPQ WHSTSFILLA ILPFLAGLLA
GWQPAGNAKV AEATGSMLVS ITWNFIVGFC VLGTALAIRV ALGHVTVQLP DVWWMYLGGP
LGLMSIGLMA ILVRGLGLLM LGVASTAGQL LGSVLIDVLI PSLGNTVYLV TIIGTLFALV
GAIVTTIPEY RASKTMKKME V