Gene EcSMS35_1078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1078 
Symbol 
ID6143944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1093426 
End bp1093833 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content53% 
IMG OID641615965 
Producthypothetical protein 
Protein accessionYP_001743157 
Protein GI170683848 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.579163 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATTC TGAACTGTTA TATGGCGAAT GACAGCAAAG GCCATTTTGT TACGGCGAAA 
GAAGCAGCGA AGCACAACCG CCAGGACGTT TTGTGCTGTG TGTCCTGTGG ATGCCCGTTA
ACACTTCAGC GGGGCAATGA CGGACAACCA CCGTGGTTTG AACATGACCA GATGACTGTC
GCTGAGAAAA TCCTGCTGCG ATGCACCTGG CTTGACCCGG CAGAGAAAGA GGCCCGTCGT
TTGCATCTGC AGGGTATGAC GGTTCCGGAT TATACGGTGA AGGTGAGAAA GTGGTTTTGT
GTGATGTGTG ACGAAAATTA TGAGGGGGAA AAGTGCTGCC CGAGTTGTGG TACCGGGGTA
TACAGCAGGG AGGGGGGGCA GGAGGGCAAC TGGAAGGATA GGAACTGA
 
Protein sequence
MRILNCYMAN DSKGHFVTAK EAAKHNRQDV LCCVSCGCPL TLQRGNDGQP PWFEHDQMTV 
AEKILLRCTW LDPAEKEARR LHLQGMTVPD YTVKVRKWFC VMCDENYEGE KCCPSCGTGV
YSREGGQEGN WKDRN