Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0988 |
Symbol | |
ID | 6143873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 1002556 |
End bp | 1003236 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641615875 |
Product | hypothetical protein |
Protein accession | YP_001743067 |
Protein GI | 170682031 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 0.244277 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGTTG CCTGGTTAAA TGACCAGCAG CCATTATTGT CGGTATTTGT CGCTGATGGC GCAGGCAGTG TCTCGCAGGG TGGCGAAGGC GCGATGCTCG CCGTCAATGA AGCGATGGCT TATATGTCGC AAAAAGTGCA GGGCGGGGAA TTGGGGCTTA ATGATGTCCT CGCCACGGAT ATTGTGCTGA CCATTCGTCA ACGACTTTTT GCCGAGGCGG AAGCCAAAGA ATTAGCGGTT CGCGATTTTG CCTGCACATT TTTGGGATTG ATTTCATCAG CTAATGGCAC CTTGATTATG CAGATTGGCG ATGGCGGCGT GGTGGTAGAT TTGGGTCACG GTTTGCAACT GCCGCTCACG CCGATGGTGG GGGAATATGC CAATATGACG CACTTCATTA CCGATGACGA TGCTGTTTCC AGACTGGAAA TTTACACCAG TACTGAGCGT GCGCATAAAG TTGCAGCATT TACGGATGGT ATTCAGCGAC TGGCGTTAAA TATGCTGGAT AATTCTCCGC ATGTGCCTTT CTTTACCCCG TTTTTCAATG GACTGGCGTC AGCAACGCAG GAACAACTCG ATTTATTACC TGAATTGTTA AAGCAGTTTT TGTCCAGCCC GGCGGTAAAC GAGCGTACGG ATGATGATAA AACGTTGGCA CTGGCTATGT GGACAGAATG A
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Protein sequence | MQVAWLNDQQ PLLSVFVADG AGSVSQGGEG AMLAVNEAMA YMSQKVQGGE LGLNDVLATD IVLTIRQRLF AEAEAKELAV RDFACTFLGL ISSANGTLIM QIGDGGVVVD LGHGLQLPLT PMVGEYANMT HFITDDDAVS RLEIYTSTER AHKVAAFTDG IQRLALNMLD NSPHVPFFTP FFNGLASATQ EQLDLLPELL KQFLSSPAVN ERTDDDKTLA LAMWTE
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