Gene EcSMS35_0988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0988 
Symbol 
ID6143873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1002556 
End bp1003236 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content50% 
IMG OID641615875 
Producthypothetical protein 
Protein accessionYP_001743067 
Protein GI170682031 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.244277 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGTTG CCTGGTTAAA TGACCAGCAG CCATTATTGT CGGTATTTGT CGCTGATGGC 
GCAGGCAGTG TCTCGCAGGG TGGCGAAGGC GCGATGCTCG CCGTCAATGA AGCGATGGCT
TATATGTCGC AAAAAGTGCA GGGCGGGGAA TTGGGGCTTA ATGATGTCCT CGCCACGGAT
ATTGTGCTGA CCATTCGTCA ACGACTTTTT GCCGAGGCGG AAGCCAAAGA ATTAGCGGTT
CGCGATTTTG CCTGCACATT TTTGGGATTG ATTTCATCAG CTAATGGCAC CTTGATTATG
CAGATTGGCG ATGGCGGCGT GGTGGTAGAT TTGGGTCACG GTTTGCAACT GCCGCTCACG
CCGATGGTGG GGGAATATGC CAATATGACG CACTTCATTA CCGATGACGA TGCTGTTTCC
AGACTGGAAA TTTACACCAG TACTGAGCGT GCGCATAAAG TTGCAGCATT TACGGATGGT
ATTCAGCGAC TGGCGTTAAA TATGCTGGAT AATTCTCCGC ATGTGCCTTT CTTTACCCCG
TTTTTCAATG GACTGGCGTC AGCAACGCAG GAACAACTCG ATTTATTACC TGAATTGTTA
AAGCAGTTTT TGTCCAGCCC GGCGGTAAAC GAGCGTACGG ATGATGATAA AACGTTGGCA
CTGGCTATGT GGACAGAATG A
 
Protein sequence
MQVAWLNDQQ PLLSVFVADG AGSVSQGGEG AMLAVNEAMA YMSQKVQGGE LGLNDVLATD 
IVLTIRQRLF AEAEAKELAV RDFACTFLGL ISSANGTLIM QIGDGGVVVD LGHGLQLPLT
PMVGEYANMT HFITDDDAVS RLEIYTSTER AHKVAAFTDG IQRLALNMLD NSPHVPFFTP
FFNGLASATQ EQLDLLPELL KQFLSSPAVN ERTDDDKTLA LAMWTE