Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0790 |
Symbol | pgl |
ID | 6146723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 790597 |
End bp | 791592 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641615678 |
Product | 6-phosphogluconolactonase |
Protein accession | YP_001742870 |
Protein GI | 170679786 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2706] 3-carboxymuconate cyclase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.971617 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCAAA CAGTTTATAT CGCCAGCCCT GAGAGCCAGC AAATTCACGT CTGGAACCTG AATCATGAAG GCGCACTGAC GCTGACACAG GTTGTCGATG TGCCGGGGCA GGTGCAGCCG ATGGTGGTCA GCCCGGACAA ACGCTATCTC TATGTTGGTG TTCGCCCTGA GTTTCGCGTC CTGGCGTATC GTATCGCCCC GGACGATGGC GCGCTGACCT TTGCCGCAGA GTCTGCGCTG CCGGGTAGTC CGACGCATAT TTCCACCGAT CACCAGGGGC AGTTTGTCTT TGTCGGTTCT TACAATGCGG GTAACGTGAG CGTAACGCGT CTGGAAGATG GCCTGCCAGT GGGCGTCGTC GATGTGGTCG AGGGGCTGGA CGGTTGCCAT TCCGCCAATA TCTCACCGGA CAACCGTACG CTGTGGGTTC CGGCATTAAA GCAGGATCGC ATTTGCCTGT TTACTGTCAG CGAGGATGGT CATCTGGTGG CGCAGGACCC TGCGGAAGTG ACTACCGTTG AAGGGGCCGG CCCGCGTCAT ATGGTATTCC ATCCAAACGA ACAATATGCG TATTGCGTCA ATGAGTTAAA CAGCTCAGTG GATGTCTGGG AACTGAAAGA TCCGCACGGC AATATCGAAT GTGTCCAGAC GCTGGATATG ATGCCGGAAA ACTTCTCCGA CACCCGTTGG GCGGCTGATA TTCATATCAC CCCGGATGGT CGTCATTTAT ACGCCTGCGA CCGTACCGCC AGCCTGATTA CCGTTTTCAG CGTTTCGGAA GATGGCAGCG TGTTGAGTAA AGAAGGCTTC CAGCCAACGG AAACCCAGCC GCGCGGCTTC AATGTTGATC ACAGCGGCAA GTATTTGATT GCCGCCGGGC AAAAATCTCA CCACATCTCG GTATACGAAA TTGTTGGCGA GCAGGGGCTA CTGCATGAAA AAGGCCGCTA TGCGGTCGGG CAGGGACCAA TGTGGGTGGT GGTTAACGCG CACTAA
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Protein sequence | MKQTVYIASP ESQQIHVWNL NHEGALTLTQ VVDVPGQVQP MVVSPDKRYL YVGVRPEFRV LAYRIAPDDG ALTFAAESAL PGSPTHISTD HQGQFVFVGS YNAGNVSVTR LEDGLPVGVV DVVEGLDGCH SANISPDNRT LWVPALKQDR ICLFTVSEDG HLVAQDPAEV TTVEGAGPRH MVFHPNEQYA YCVNELNSSV DVWELKDPHG NIECVQTLDM MPENFSDTRW AADIHITPDG RHLYACDRTA SLITVFSVSE DGSVLSKEGF QPTETQPRGF NVDHSGKYLI AAGQKSHHIS VYEIVGEQGL LHEKGRYAVG QGPMWVVVNA H
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