| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0624 |
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| Symbol | |
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| ID | 6144180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 637570 |
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| End bp | 638472 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641615516 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001742722 |
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| Protein GI | 170683688 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.754981 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAATC TTTATGATCT AAAAAAATTT GACCTCAATT TACTGGTTAT ATTTGAATGT
ATTTATCAAC ATCTCAGCAT TAGTAAAGCG GCAGAATCAT TATATATAAC GCCCTCTGCT
GTTAGTCAGT CGTTACAACG TTTACGTGCG CAATTTAATG ACCCGTTATT CATTCGCTCA
GGGAAAGGTA TCGCGCCGAC TACAACAGGG TTAAACCTGC ATCACCATCT TGAGAAAAAT
CTCAGAGGCC TTGAACAAAC GATCAATATC GTTAATAAGT CTGAACTAAA GAAAAATTTT
ATTATCTACG GTCCTCAGCT TATTTCTTGT ACTAATAACA ACATGCTAAT CCGCTGTCTT
AGACAAGATA CTTCAATCGA TATAGAATGC CATGACATAC TGCTTTCAGC TGAAAATGCC
GAAGAACTGT TGGTTCAACG CAAAACTGAC CTGGCAATTA CACTACAACC AGTAATTAGC
CGCTCTGTCA TCTGCATGCC GTTACATACT ATTCGCAATT CTCTTATATG TAGCAACAGA
CATCCTCGTA TTACCGATAC CAGTAACTAT GAACAAATTA TCGCCGAAGA ATTCACCCTG
TTGATATCTA AATCAGCAGG GATTGACGAA ATTCAAATGG ACATAGATGA ACGTTTTATG
AACCGTAAAG TTTCATTTCG CAGTTCTTCT TTGATGACTA TAATTAATAG TATTTCTGTT
ACTGACTTAT TAGGCATTGT GCCCACCGAA CTGTACAATT TACATCGTGA CTTTTTGAAG
TTAAAAGAAA TAAAACTGGA ACAACCTCTT CCTGCGGTTA AACTTTATAT TTCCTATAAC
AAGGCTTCGT TGAACAACCT TGTCTTCTCC CGATTCATAG ATCGTTTAAA TGATAGCTTC
TGA
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| Protein sequence | MANLYDLKKF DLNLLVIFEC IYQHLSISKA AESLYITPSA VSQSLQRLRA QFNDPLFIRS
GKGIAPTTTG LNLHHHLEKN LRGLEQTINI VNKSELKKNF IIYGPQLISC TNNNMLIRCL
RQDTSIDIEC HDILLSAENA EELLVQRKTD LAITLQPVIS RSVICMPLHT IRNSLICSNR
HPRITDTSNY EQIIAEEFTL LISKSAGIDE IQMDIDERFM NRKVSFRSSS LMTIINSISV
TDLLGIVPTE LYNLHRDFLK LKEIKLEQPL PAVKLYISYN KASLNNLVFS RFIDRLNDSF
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