| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0500 |
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| Symbol | |
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| ID | 6146235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 505380 |
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| End bp | 506930 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641615394 |
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| Product | cyclic diguanylate phosphodiesterase domain-containing protein |
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| Protein accession | YP_001742601 |
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| Protein GI | 170682326 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4943] Predicted signal transduction protein containing sensor and EAL domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGAACAC GACATCTGGT CGGCCTTATT TCGGGAGTAC TGATTCTTTC AGTATTGCTG
CCTGTCGGCT TAAGCATCTG GCTGGCCCAT CAGCAGGTAG AAACATCATT TATTGAAGAG
CTGAATACGT ATTCCTCCCG CGTCGCTATT CGGGCCAATA AGGTGGCGAC ACAAGGGAAA
GATGCGCTGC AAGAGCTGGA AAGATGGCAA GGCGCTGCCT GTAGCGAAGC CCATCTCATG
GAAATGCGTC GGGTATCTTA CAGTTATCGC TATATTCAGG AAGTGGTTTA TATCGATAAC
AACGTTCCCC AGTGTTCGTC TCTGGAGCAT GAAAGCCCGC CCGATACCTT CCCCGAGCCA
GGTAAAATTT CGAAAGATGG TTATCGTGTC TGGTTAACAT CGCATAACGA TTTAGGCATT
ATCCGTTACA TGGTCGCCAT GGGAACGGCA CATTATGTCG TCATGATCGA CCCCGCTTCC
TTTATTGATG TCATTCCCTA TAGCTCATGG CAAATTGATG CCGCCATTAT TGGCAATGCC
CATAACGTTG TGATAACCAG CAGTGATGAA ATTGCTCAGG GAATTATTAC CAGACTACAA
AAAACACCCG GTGAGCATAT CGAAAATAAT GGAATCATTT ACGATATCCT GCCCTTACCG
GAGATGAATA TTTCGATCAT CACCTGGGCT TCAACGAAAA TGTTGCAGAA AGGCTGGCAT
CGGCAAGTCT TTATTTGGTT ACCGTTCGGG TTGGTGATTG GCCTGCTGGC AGCGATGTTT
GTGCTGCGTA TTTTGCGCCG TATCCAGTCA CCGCATCATC GGCTGCAGGA TGCTATCGAA
AATCGTGATA TTTGCGTGCA CTATCAGCCG ATTGTCTCCT TAGCCAATGG CAAAATTGTC
GGTGCTGAGG CACTGGCGCG CTGGCCGCAG ACAGACGGTA GTTGGTTGTC ACCAGATAGT
TTTATTCCGC TGGCACAGCA AACGGGGCTT TCTGAGCCGT TGACGCTACT GATTATAAAA
AGTGTCTTTG AAGATATGGG CGACTGGCTG CGTCAGCATC CGCAGCAGCA TATTTCGATC
AATCTTGAAT CCACCGTGCT CACCTCGGAA AAAATCCCGC AATTGCTGCG TGAAATGATC
AATCACTATC AGGTTAATCC CAGACAGATC GCGCTTGAAC TCACTGAACG CGAGTTTGCC
GATCCGAAAA CCAGCGCCCC GATAATTTCT CGCTACCGGG AGGCGGGCCA TGAAATTTAT
CTCGATGATT TTGGTACGGG GTATTCAAGT TTAAGCTATT TACAGGATCT GGATGTCGAC
ATTCTGAAGA TCGATAAATC TTTCGTTGAT GCGCTGGAAT ATAAAAATGT CACGCCACAT
ATCATCGAAA TGGCAAAAAC ACTGAAACTG AAAATGGTAG CGGAGGGAAT CGAAACCAGT
AAACAAGAAG AGTGGCTACG TCAGCATAGC GTGCACTACG GCCAGGGCTG GCTCTACAGC
AAGGCATTAC CGAAAGAGGA TTTCTTACGC TGGGCCGAGC AACATTTGTG A
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| Protein sequence | MRTRHLVGLI SGVLILSVLL PVGLSIWLAH QQVETSFIEE LNTYSSRVAI RANKVATQGK
DALQELERWQ GAACSEAHLM EMRRVSYSYR YIQEVVYIDN NVPQCSSLEH ESPPDTFPEP
GKISKDGYRV WLTSHNDLGI IRYMVAMGTA HYVVMIDPAS FIDVIPYSSW QIDAAIIGNA
HNVVITSSDE IAQGIITRLQ KTPGEHIENN GIIYDILPLP EMNISIITWA STKMLQKGWH
RQVFIWLPFG LVIGLLAAMF VLRILRRIQS PHHRLQDAIE NRDICVHYQP IVSLANGKIV
GAEALARWPQ TDGSWLSPDS FIPLAQQTGL SEPLTLLIIK SVFEDMGDWL RQHPQQHISI
NLESTVLTSE KIPQLLREMI NHYQVNPRQI ALELTEREFA DPKTSAPIIS RYREAGHEIY
LDDFGTGYSS LSYLQDLDVD ILKIDKSFVD ALEYKNVTPH IIEMAKTLKL KMVAEGIETS
KQEEWLRQHS VHYGQGWLYS KALPKEDFLR WAEQHL
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