| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0486 |
|---|
| Symbol | |
|---|
| ID | 6145234 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 492716 |
|---|
| End bp | 493114 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641615380 |
|---|
| Product | thioesterase family protein |
|---|
| Protein accession | YP_001742587 |
|---|
| Protein GI | 170679664 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0824] Predicted thioesterase |
|---|
| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00849575 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACAC AAATCAAAGT TCGTGGATAT CATCTCGACG TTTACCAGCA CGTAAACAAC
GCCCGCTACC TTGAATTTCT CGAAGAAGCC CGCTGGGATG GGTTGGAAAA TAGCGACAGT
TTTCAGTGGA TGACGGCCCA TAACATCGCC TTCGTCGTGG TCAATATCAA TATTAACTAT
CGTCGCCCGG CGGTATTAAG CGACCTGTTA ACTATTACCA GTCAGTTGCA GCAATTAAAC
GGTAAAAGTG GCATCTTAAG CCAGGTCATT ACACTGGAGC CGGAAGGGCA GGTAGTAGCG
GATGCGCTTA TTACGTTTGT TTGTATTGAT CTTAAAACGC AGAAAGCATT AGCTCTGGAA
GGGGAATTGC GCGAAAAGCT GGAGCAGATG GTTAAGTAA
|
|---|
| Protein sequence | MQTQIKVRGY HLDVYQHVNN ARYLEFLEEA RWDGLENSDS FQWMTAHNIA FVVVNININY
RRPAVLSDLL TITSQLQQLN GKSGILSQVI TLEPEGQVVA DALITFVCID LKTQKALALE
GELREKLEQM VK
|
|---|
| |