| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0402 |
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| Symbol | |
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| ID | 6146526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 414664 |
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| End bp | 416808 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641615298 |
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| Product | outer membrane autotransporter |
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| Protein accession | YP_001742505 |
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| Protein GI | 170683055 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3468] Type V secretory pathway, adhesin AidA |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain
[TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTGGAAA GTTCTGGTTA TGGTCATTTC GGTAACTCTG GTGAGCCGAG TGATTATGCT
GGTCCGGGTG ACGTTGCATT GTCTTTCACT GACAGTACTT CAGACTATGC AATGAAGAAC
AATGTATATT TCAGCAATTC TACTCTGGTG GGTGATGTTG CGTTTACCAG CACCTGGAAT
GCTAATTTTG ATCCAAGTGG TCATGATTCT AACGGTGACG GCGTAAAAGA TACCAATGCT
GGTTGGGTTG ATGATAGCCT GAACGTTGAT GAGCTGAATA TTACTCTTGA TAATGGAAGC
AAGTGGGTTG GACAGGCTAC ATTCAATGCT GAAACCATTT CTCCAGACAC AATGTATGAT
GTTGCAACTA ACAGTTTGAC CCCTGGTGGA ACAGCTGAAG CTAATGGTTG GAATCGCATC
ATCGATAATA AAGTATTCCA GAGTGGTGTA TTTAACGTAG CGTTGAACAA CGGTTCTGAA
TGGGATACTA CAGGTCGTTC CGTCGTTGAT ACCTTGACAG TTAATAATGC TTCTCAGGTT
AATGTTTCGG AATCTAAATT AACTTCAGAT ACTATCGATT TAACTAACGG TTCTTCGCTG
AACATTGGTG AAGATGGTTA CGTTGATACC GATCATCTGA CTATTAACTC CTACAGTACT
GTTGCGTTGA CCGAATCTAC AGGTTGGGGT GCTGATTACA ACCTGTACGC CAATACCATC
ACCGTAACTA ACGGTGGTGT ATTGGATGTG AACGTTGATC AGTTCGATAC TGAAGCTTTC
CGTACTGACA AACTGGAACT GACCAGCGGC AACATTGCTG ACAATAATGG TAATGTAGTA
TCCGGTGTAT TCGATATCCA CAGCAGCGAT TATGTTCTGA ACGCTGACTT GGTGAACGAC
CGTACCTGGG ATACTTCCAA GTCTAACTAC GGCTACGGTA TTGTTGCTAT GAACTCTGAT
GGTCATCTGA CTATCAATGG TAACGGCGAC ATGAACAACG GCGACGAACT GGATAACAGC
TCTGTAGACA ACGTTGTTGC TGCAACCGGT AACTATAAAG TTCGTATCGA CAACGCAACT
GGCGCTGGCG CAATCGCTGA TTACAAAGAT AAAGAAATTA TCTACGTAAA CGACGTCAAC
AGCAACGCGA CCTTCTCTGC TGCTAACAAA GCTGACCTGG GTGCATACAC CTATCAGGCT
GAACAGCGTG GTAACACCGT TGTTCTGCAA CAGATGGAGC TGACCGACTA CGCTAACATG
GCGCTGAGCA TCCCGTCTGC GAACACCAAT ATCTGGAACC TGGAACAAGA CACCGTTGGT
ACTCGTCTGA CCAACTCTCG TCATGGCCTG GCTGATAACG GCGGCGCATG GGTAAGCTAC
TTCGGTGGTA ACTTCAACGG CGACAACGGC ACCATCAACT ATGATCAGGA TGTTAACGGC
ATCATGGTCG GTGTTGATAC CAAAATTGAC GGTAACAACG CTAAGTGGAT CGTCGGTGCG
GCTGCAGGCT TCGCTAAAGG TGACATGAAT GACCGTTCTG GTCAGGTGGA TCAAGACAGC
CAGACTGCCT ACATCTACTC TTCTGCTCAC TTCGCGAACA ACGTCTTTGT TGATGGTAGC
TTGAGCTACT CTCACTTCAA CAACGACCTG TCTGCAACCA TGAGCAACGG TACTTATGTT
GATGGTAGCA CCAACTCCGA CGCTTGGGGC TTCGGTTTGA AAGCCGGTTA CGACTTCAAA
CTGGGTGATG CTGGTTACGT GACTCCTTAC GGCAGCGTTT CTGGTCTGTT CCAGTCTGGT
GATGACTACC AGCTGAGCAA CAACATGAAA GTTGACGGTC AGTCTTACGA CAGCATGCGT
TATGAACTGG GTGTAGATGC AGGTTATACC TTCACCTACA GCGAAGACCA GGCTCTGACT
CCGTACTTCA AACTGGCTTA CGTTTACGAC GACTCTAACA ACCATAACGA TGTGAACGGT
GATTCCATCG ATAACGGTAC TGAAGGGTCT GCGGTACGTG TTGGTCTGGG TACTCAGTTC
AGCTTCACCA AGAACTTCAG CGCCTATACC GATGCTAACT ACCTCGGTGG TGGTGACGTA
GATCAAGACT GGTCCGCGAA CGTGGGTGTT AAATATACCT GGTAA
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| Protein sequence | MLESSGYGHF GNSGEPSDYA GPGDVALSFT DSTSDYAMKN NVYFSNSTLV GDVAFTSTWN
ANFDPSGHDS NGDGVKDTNA GWVDDSLNVD ELNITLDNGS KWVGQATFNA ETISPDTMYD
VATNSLTPGG TAEANGWNRI IDNKVFQSGV FNVALNNGSE WDTTGRSVVD TLTVNNASQV
NVSESKLTSD TIDLTNGSSL NIGEDGYVDT DHLTINSYST VALTESTGWG ADYNLYANTI
TVTNGGVLDV NVDQFDTEAF RTDKLELTSG NIADNNGNVV SGVFDIHSSD YVLNADLVND
RTWDTSKSNY GYGIVAMNSD GHLTINGNGD MNNGDELDNS SVDNVVAATG NYKVRIDNAT
GAGAIADYKD KEIIYVNDVN SNATFSAANK ADLGAYTYQA EQRGNTVVLQ QMELTDYANM
ALSIPSANTN IWNLEQDTVG TRLTNSRHGL ADNGGAWVSY FGGNFNGDNG TINYDQDVNG
IMVGVDTKID GNNAKWIVGA AAGFAKGDMN DRSGQVDQDS QTAYIYSSAH FANNVFVDGS
LSYSHFNNDL SATMSNGTYV DGSTNSDAWG FGLKAGYDFK LGDAGYVTPY GSVSGLFQSG
DDYQLSNNMK VDGQSYDSMR YELGVDAGYT FTYSEDQALT PYFKLAYVYD DSNNHNDVNG
DSIDNGTEGS AVRVGLGTQF SFTKNFSAYT DANYLGGGDV DQDWSANVGV KYTW
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